Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHRNA3P32297 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHRNA3P32297 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHRNA3P32297 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CHRNA3P32297 RN7SKP95-201ENST00000362860 303 ntBASIC5.12□□□□□ -1.59
CHRNA3P32297 Z97832.1-201ENST00000402490 328 ntBASIC5.12□□□□□ -1.59
CHRNA3P32297 AC233289.1-201ENST00000403700 508 ntBASIC5.12□□□□□ -1.59
CHRNA3P32297 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.12□□□□□ -1.59
CHRNA3P32297 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CHRNA3P32297 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.12□□□□□ -1.59
CHRNA3P32297 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.12□□□□□ -1.59
CHRNA3P32297 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.12□□□□□ -1.59
CHRNA3P32297 AL157884.3-201ENST00000448273 1184 ntBASIC5.12□□□□□ -1.59
CHRNA3P32297 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.12□□□□□ -1.59
CHRNA3P32297 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.12□□□□□ -1.59
CHRNA3P32297 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.12□□□□□ -1.59
CHRNA3P32297 AC140172.1-201ENST00000502928 141 ntBASIC5.12□□□□□ -1.59
CHRNA3P32297 HAUS1P1-201ENST00000505275 832 ntBASIC5.12□□□□□ -1.59
CHRNA3P32297 AL671862.1-201ENST00000515851 349 ntBASIC5.12□□□□□ -1.59
CHRNA3P32297 RNA5SP43-201ENST00000516559 110 ntBASIC5.12□□□□□ -1.59
CHRNA3P32297 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.12□□□□□ -1.59
CHRNA3P32297 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.12□□□□□ -1.59
CHRNA3P32297 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.12□□□□□ -1.59
CHRNA3P32297 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.12□□□□□ -1.59
CHRNA3P32297 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC5.12□□□□□ -1.59
CHRNA3P32297 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.12□□□□□ -1.59
CHRNA3P32297 MIR3934-201ENST00000579806 107 ntBASIC5.12□□□□□ -1.59
CHRNA3P32297 AP005262.1-201ENST00000582646 997 ntBASIC5.12□□□□□ -1.59
CHRNA3P32297 MEMO1P5-201ENST00000604810 406 ntBASIC5.12□□□□□ -1.59
CHRNA3P32297 AL391597.1-201ENST00000618707 694 ntBASIC5.12□□□□□ -1.59
CHRNA3P32297 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.12□□□□□ -1.59
CHRNA3P32297 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.12□□□□□ -1.59
CHRNA3P32297 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CHRNA3P32297 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
CHRNA3P32297 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHRNA3P32297 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CHRNA3P32297 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.11□□□□□ -1.59
CHRNA3P32297 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CHRNA3P32297 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.11□□□□□ -1.59
CHRNA3P32297 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHRNA3P32297 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHRNA3P32297 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.11□□□□□ -1.59
CHRNA3P32297 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.11□□□□□ -1.59
CHRNA3P32297 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CHRNA3P32297 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.11□□□□□ -1.59
CHRNA3P32297 AP002530.1-201ENST00000405705 684 ntBASIC5.11□□□□□ -1.59
CHRNA3P32297 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.11□□□□□ -1.59
CHRNA3P32297 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.11□□□□□ -1.59
CHRNA3P32297 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.11□□□□□ -1.59
CHRNA3P32297 CHEK2P3-201ENST00000416118 248 ntBASIC5.11□□□□□ -1.59
CHRNA3P32297 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CHRNA3P32297 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.11□□□□□ -1.59
CHRNA3P32297 MTCO1P45-201ENST00000431457 267 ntBASIC5.11□□□□□ -1.59
CHRNA3P32297 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.11□□□□□ -1.59
CHRNA3P32297 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.11□□□□□ -1.59
CHRNA3P32297 PRPF38AP2-201ENST00000438179 851 ntBASIC5.11□□□□□ -1.59
CHRNA3P32297 AL772161.1-201ENST00000439130 476 ntBASIC5.11□□□□□ -1.59
CHRNA3P32297 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.11□□□□□ -1.59
CHRNA3P32297 OR7E125P-201ENST00000443450 846 ntBASIC5.11□□□□□ -1.59
CHRNA3P32297 TCEA1P1-201ENST00000449716 880 ntBASIC5.11□□□□□ -1.59
CHRNA3P32297 IGHV5-78-201ENST00000450948 295 ntBASIC5.11□□□□□ -1.59
CHRNA3P32297 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.11□□□□□ -1.59
CHRNA3P32297 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.11□□□□□ -1.59
CHRNA3P32297 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.11□□□□□ -1.59
CHRNA3P32297 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.11□□□□□ -1.59
CHRNA3P32297 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.11□□□□□ -1.59
CHRNA3P32297 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.11□□□□□ -1.59
CHRNA3P32297 BRD9P1-201ENST00000529855 560 ntBASIC5.11□□□□□ -1.59
CHRNA3P32297 AC008033.2-201ENST00000542626 177 ntBASIC5.11□□□□□ -1.59
CHRNA3P32297 AC087888.1-201ENST00000550884 1254 ntBASIC5.11□□□□□ -1.59
CHRNA3P32297 PCNPP1-201ENST00000552501 511 ntBASIC5.11□□□□□ -1.59
CHRNA3P32297 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.11□□□□□ -1.59
CHRNA3P32297 SULT1C2P2-201ENST00000562517 294 ntBASIC5.11□□□□□ -1.59
CHRNA3P32297 AC005084.1-201ENST00000605160 304 ntBASIC5.11□□□□□ -1.59
CHRNA3P32297 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CHRNA3P32297 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.11□□□□□ -1.59
CHRNA3P32297 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.11□□□□□ -1.59
CHRNA3P32297 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
CHRNA3P32297 SOCS5P3-201ENST00000425115 1576 ntBASIC5.11□□□□□ -1.59
CHRNA3P32297 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CHRNA3P32297 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CHRNA3P32297 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CHRNA3P32297 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CHRNA3P32297 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.1□□□□□ -1.59
CHRNA3P32297 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHRNA3P32297 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHRNA3P32297 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHRNA3P32297 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
CHRNA3P32297 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CHRNA3P32297 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CHRNA3P32297 RNU1-83P-201ENST00000363426 164 ntBASIC5.1□□□□□ -1.59
CHRNA3P32297 RNU6-618P-201ENST00000363518 112 ntBASIC5.1□□□□□ -1.59
CHRNA3P32297 RN7SKP103-201ENST00000363848 320 ntBASIC5.1□□□□□ -1.59
CHRNA3P32297 RNU6-819P-201ENST00000364116 107 ntBASIC5.1□□□□□ -1.59
CHRNA3P32297 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC5.1□□□□□ -1.59
CHRNA3P32297 AL136116.2-201ENST00000404020 785 ntBASIC5.1□□□□□ -1.59
CHRNA3P32297 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.1□□□□□ -1.59
CHRNA3P32297 RNA5SP296-201ENST00000410523 111 ntBASIC5.1□□□□□ -1.59
CHRNA3P32297 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.1□□□□□ -1.59
CHRNA3P32297 RBMY2KP-201ENST00000418221 992 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms