Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CD40LGP29965 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CD40LGP29965 AC114546.3-201ENST00000623582 1734 ntBASIC4.29□□□□□ -1.72
CD40LGP29965 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.29□□□□□ -1.72
CD40LGP29965 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CD40LGP29965 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CD40LGP29965 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.29□□□□□ -1.72
CD40LGP29965 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CD40LGP29965 SNORD74.4-201ENST00000364129 80 ntBASIC4.29□□□□□ -1.72
CD40LGP29965 RNU6-146P-201ENST00000384602 108 ntBASIC4.29□□□□□ -1.72
CD40LGP29965 MIR708-201ENST00000390708 88 ntBASIC4.29□□□□□ -1.72
CD40LGP29965 OR3A2-201ENST00000408891 1076 ntBASIC4.29□□□□□ -1.72
CD40LGP29965 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CD40LGP29965 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.29□□□□□ -1.72
CD40LGP29965 AL596448.1-201ENST00000415024 392 ntBASIC4.29□□□□□ -1.72
CD40LGP29965 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.29□□□□□ -1.72
CD40LGP29965 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.29□□□□□ -1.72
CD40LGP29965 AC093084.1-201ENST00000424233 687 ntBASIC4.29□□□□□ -1.72
CD40LGP29965 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.29□□□□□ -1.72
CD40LGP29965 SPRYD7P1-201ENST00000443861 570 ntBASIC4.29□□□□□ -1.72
CD40LGP29965 AL451050.1-201ENST00000450126 415 ntBASIC4.29□□□□□ -1.72
CD40LGP29965 AC016724.1-201ENST00000453215 421 ntBASIC4.29□□□□□ -1.72
CD40LGP29965 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.29□□□□□ -1.72
CD40LGP29965 RN7SL443P-201ENST00000464331 290 ntBASIC4.29□□□□□ -1.72
CD40LGP29965 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CD40LGP29965 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.29□□□□□ -1.72
CD40LGP29965 RNU6-941P-201ENST00000516346 108 ntBASIC4.29□□□□□ -1.72
CD40LGP29965 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.29□□□□□ -1.72
CD40LGP29965 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.29□□□□□ -1.72
CD40LGP29965 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.29□□□□□ -1.72
CD40LGP29965 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.29□□□□□ -1.72
CD40LGP29965 HMGB1P40-201ENST00000525121 540 ntBASIC4.29□□□□□ -1.72
CD40LGP29965 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.29□□□□□ -1.72
CD40LGP29965 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CD40LGP29965 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.29□□□□□ -1.72
CD40LGP29965 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.29□□□□□ -1.72
CD40LGP29965 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.29□□□□□ -1.72
CD40LGP29965 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.29□□□□□ -1.72
CD40LGP29965 AC005377.1-201ENST00000605126 456 ntBASIC4.29□□□□□ -1.72
CD40LGP29965 AC012414.7-202ENST00000622705 1090 ntBASIC4.29□□□□□ -1.72
CD40LGP29965 AC067852.7-201ENST00000623270 535 ntBASIC4.29□□□□□ -1.72
CD40LGP29965 AP006248.2-201ENST00000623309 592 ntBASIC4.29□□□□□ -1.72
CD40LGP29965 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CD40LGP29965 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CD40LGP29965 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.29□□□□□ -1.72
CD40LGP29965 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CD40LGP29965 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.29□□□□□ -1.72
CD40LGP29965 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CD40LGP29965 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.28□□□□□ -1.72
CD40LGP29965 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CD40LGP29965 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CD40LGP29965 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CD40LGP29965 RNA5SP39-201ENST00000411245 120 ntBASIC4.28□□□□□ -1.72
CD40LGP29965 RPL23AP4-201ENST00000427757 463 ntBASIC4.28□□□□□ -1.72
CD40LGP29965 NANOGP6-201ENST00000429190 847 ntBASIC4.28□□□□□ -1.72
CD40LGP29965 FAM96AP1-201ENST00000430879 482 ntBASIC4.28□□□□□ -1.72
CD40LGP29965 CYCSP11-201ENST00000436426 315 ntBASIC4.28□□□□□ -1.72
CD40LGP29965 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CD40LGP29965 SCARNA10-201ENST00000459255 330 ntBASIC4.28□□□□□ -1.72
CD40LGP29965 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.28□□□□□ -1.72
CD40LGP29965 RN7SL174P-201ENST00000475578 289 ntBASIC4.28□□□□□ -1.72
CD40LGP29965 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.28□□□□□ -1.72
CD40LGP29965 AC106872.4-201ENST00000510050 523 ntBASIC4.28□□□□□ -1.72
CD40LGP29965 VWA8P1-201ENST00000510889 176 ntBASIC4.28□□□□□ -1.72
CD40LGP29965 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.28□□□□□ -1.72
CD40LGP29965 NPM1P52-201ENST00000518264 846 ntBASIC4.28□□□□□ -1.72
CD40LGP29965 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.28□□□□□ -1.72
CD40LGP29965 AC012400.1-201ENST00000518452 381 ntBASIC4.28□□□□□ -1.72
CD40LGP29965 AC026688.1-201ENST00000520639 1168 ntBASIC4.28□□□□□ -1.72
CD40LGP29965 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.28□□□□□ -1.72
CD40LGP29965 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.28□□□□□ -1.72
CD40LGP29965 DEFB109D-201ENST00000529497 240 ntBASIC4.28□□□□□ -1.72
CD40LGP29965 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.28□□□□□ -1.72
CD40LGP29965 AC012146.2-201ENST00000576545 416 ntBASIC4.28□□□□□ -1.72
CD40LGP29965 AC209154.1-201ENST00000582156 337 ntBASIC4.28□□□□□ -1.72
CD40LGP29965 HMGB2P1-201ENST00000591146 634 ntBASIC4.28□□□□□ -1.72
CD40LGP29965 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.28□□□□□ -1.72
CD40LGP29965 RNA5SP440-201ENST00000612665 119 ntBASIC4.28□□□□□ -1.72
CD40LGP29965 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CD40LGP29965 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CD40LGP29965 AC012020.1-201ENST00000624541 1728 ntBASIC4.28□□□□□ -1.72
CD40LGP29965 AC022893.2-201ENST00000564832 3296 ntBASIC4.28□□□□□ -1.72
CD40LGP29965 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.28□□□□□ -1.72
CD40LGP29965 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.28□□□□□ -1.72
CD40LGP29965 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.28□□□□□ -1.72
CD40LGP29965 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CD40LGP29965 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.27□□□□□ -1.73
CD40LGP29965 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.27□□□□□ -1.73
CD40LGP29965 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CD40LGP29965 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.27□□□□□ -1.73
CD40LGP29965 AC016588.2-201ENST00000632484 3021 ntBASIC4.27□□□□□ -1.73
CD40LGP29965 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.27□□□□□ -1.73
CD40LGP29965 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CD40LGP29965 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CD40LGP29965 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CD40LGP29965 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CD40LGP29965 RNA5SP513-201ENST00000364648 118 ntBASIC4.27□□□□□ -1.73
CD40LGP29965 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CD40LGP29965 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CD40LGP29965 AL133388.1-201ENST00000404509 287 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms