Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CXCL3P19876 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CXCL3P19876 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC3.89□□□□□ -1.79
CXCL3P19876 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CXCL3P19876 AC018555.1-201ENST00000567548 1980 ntBASIC3.89□□□□□ -1.79
CXCL3P19876 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.89□□□□□ -1.79
CXCL3P19876 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CXCL3P19876 AL136164.3-201ENST00000624429 3978 ntBASIC3.88□□□□□ -1.79
CXCL3P19876 AL031119.1-201ENST00000404707 1879 ntBASIC3.88□□□□□ -1.79
CXCL3P19876 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
CXCL3P19876 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CXCL3P19876 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CXCL3P19876 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.88□□□□□ -1.79
CXCL3P19876 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CXCL3P19876 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CXCL3P19876 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.88□□□□□ -1.79
CXCL3P19876 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CXCL3P19876 RNU1-44P-201ENST00000384453 163 ntBASIC3.88□□□□□ -1.79
CXCL3P19876 MIR621-201ENST00000384919 96 ntBASIC3.88□□□□□ -1.79
CXCL3P19876 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CXCL3P19876 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
CXCL3P19876 AL031985.1-201ENST00000392713 418 ntBASIC3.88□□□□□ -1.79
CXCL3P19876 RN7SKP293-201ENST00000411389 296 ntBASIC3.88□□□□□ -1.79
CXCL3P19876 VN1R3-201ENST00000418822 919 ntBASIC3.88□□□□□ -1.79
CXCL3P19876 AC093655.2-201ENST00000425735 631 ntBASIC3.88□□□□□ -1.79
CXCL3P19876 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC3.88□□□□□ -1.79
CXCL3P19876 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CXCL3P19876 ELOCP8-201ENST00000439309 332 ntBASIC3.88□□□□□ -1.79
CXCL3P19876 ELOCP15-201ENST00000442090 332 ntBASIC3.88□□□□□ -1.79
CXCL3P19876 EIF4A1P6-201ENST00000448133 1210 ntBASIC3.88□□□□□ -1.79
CXCL3P19876 AC133473.1-201ENST00000455173 299 ntBASIC3.88□□□□□ -1.79
CXCL3P19876 AL133477.1-201ENST00000457472 514 ntBASIC3.88□□□□□ -1.79
CXCL3P19876 AC015864.1-201ENST00000496512 544 ntBASIC3.88□□□□□ -1.79
CXCL3P19876 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC3.88□□□□□ -1.79
CXCL3P19876 PARP4P3-201ENST00000510265 317 ntBASIC3.88□□□□□ -1.79
CXCL3P19876 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.88□□□□□ -1.79
CXCL3P19876 IGHV3-63-201ENST00000518422 341 ntBASIC3.88□□□□□ -1.79
CXCL3P19876 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC3.88□□□□□ -1.79
CXCL3P19876 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
CXCL3P19876 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC3.88□□□□□ -1.79
CXCL3P19876 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.88□□□□□ -1.79
CXCL3P19876 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CXCL3P19876 AC126177.5-201ENST00000549599 178 ntBASIC3.88□□□□□ -1.79
CXCL3P19876 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC3.88□□□□□ -1.79
CXCL3P19876 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.88□□□□□ -1.79
CXCL3P19876 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC3.88□□□□□ -1.79
CXCL3P19876 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC3.88□□□□□ -1.79
CXCL3P19876 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.88□□□□□ -1.79
CXCL3P19876 MIR6778-201ENST00000617912 73 ntBASIC3.88□□□□□ -1.79
CXCL3P19876 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.88□□□□□ -1.79
CXCL3P19876 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
CXCL3P19876 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CXCL3P19876 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CXCL3P19876 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CXCL3P19876 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CXCL3P19876 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC3.88□□□□□ -1.79
CXCL3P19876 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CXCL3P19876 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CXCL3P19876 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CXCL3P19876 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.88□□□□□ -1.79
CXCL3P19876 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CXCL3P19876 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CXCL3P19876 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
CXCL3P19876 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CXCL3P19876 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CXCL3P19876 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CXCL3P19876 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
CXCL3P19876 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CXCL3P19876 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CXCL3P19876 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
CXCL3P19876 SNORA67-201ENST00000384423 137 ntBASIC3.87□□□□□ -1.79
CXCL3P19876 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
CXCL3P19876 AC009804.1-201ENST00000400949 179 ntBASIC3.87□□□□□ -1.79
CXCL3P19876 RNA5SP306-201ENST00000411087 107 ntBASIC3.87□□□□□ -1.79
CXCL3P19876 UBTFL3-201ENST00000418934 1024 ntBASIC3.87□□□□□ -1.79
CXCL3P19876 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.87□□□□□ -1.79
CXCL3P19876 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC3.87□□□□□ -1.79
CXCL3P19876 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CXCL3P19876 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CXCL3P19876 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC3.87□□□□□ -1.79
CXCL3P19876 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC3.87□□□□□ -1.79
CXCL3P19876 PTMAP3-201ENST00000447474 330 ntBASIC3.87□□□□□ -1.79
CXCL3P19876 UBTFL6-201ENST00000477929 1024 ntBASIC3.87□□□□□ -1.79
CXCL3P19876 PPIAP19-201ENST00000486414 492 ntBASIC3.87□□□□□ -1.79
CXCL3P19876 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CXCL3P19876 TRIM36-IT1-201ENST00000503723 881 ntBASIC3.87□□□□□ -1.79
CXCL3P19876 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC3.87□□□□□ -1.79
CXCL3P19876 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.87□□□□□ -1.79
CXCL3P19876 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
CXCL3P19876 IGHVII-60-1-201ENST00000519079 256 ntBASIC3.87□□□□□ -1.79
CXCL3P19876 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC3.87□□□□□ -1.79
CXCL3P19876 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC3.87□□□□□ -1.79
CXCL3P19876 OR5M7P-201ENST00000526140 972 ntBASIC3.87□□□□□ -1.79
CXCL3P19876 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC3.87□□□□□ -1.79
CXCL3P19876 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.87□□□□□ -1.79
CXCL3P19876 MTND2P13-201ENST00000577438 1039 ntBASIC3.87□□□□□ -1.79
CXCL3P19876 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC3.87□□□□□ -1.79
CXCL3P19876 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC3.87□□□□□ -1.79
CXCL3P19876 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC3.87□□□□□ -1.79
CXCL3P19876 AC069307.1-201ENST00000602820 447 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 207.2 ms