Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 AC091685.2-201ENST00000454924 864 ntBASIC4.07□□□□□ -1.76
CTLA4P16410 SCARNA10-201ENST00000459255 330 ntBASIC4.07□□□□□ -1.76
CTLA4P16410 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.07□□□□□ -1.76
CTLA4P16410 RPS3AP41-201ENST00000462701 778 ntBASIC4.07□□□□□ -1.76
CTLA4P16410 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
CTLA4P16410 NDUFB5P1-201ENST00000508134 564 ntBASIC4.07□□□□□ -1.76
CTLA4P16410 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.07□□□□□ -1.76
CTLA4P16410 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.07□□□□□ -1.76
CTLA4P16410 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CTLA4P16410 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.07□□□□□ -1.76
CTLA4P16410 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CTLA4P16410 GSTP1P1-201ENST00000548078 319 ntBASIC4.07□□□□□ -1.76
CTLA4P16410 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.07□□□□□ -1.76
CTLA4P16410 AL390334.1-201ENST00000556395 450 ntBASIC4.07□□□□□ -1.76
CTLA4P16410 MIR4737-201ENST00000583979 81 ntBASIC4.07□□□□□ -1.76
CTLA4P16410 HMGB2P1-201ENST00000591146 634 ntBASIC4.07□□□□□ -1.76
CTLA4P16410 AC023762.1-201ENST00000603280 584 ntBASIC4.07□□□□□ -1.76
CTLA4P16410 AC008966.2-201ENST00000606157 453 ntBASIC4.07□□□□□ -1.76
CTLA4P16410 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.07□□□□□ -1.76
CTLA4P16410 U3.53-201ENST00000628922 216 ntBASIC4.07□□□□□ -1.76
CTLA4P16410 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CTLA4P16410 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CTLA4P16410 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CTLA4P16410 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.07□□□□□ -1.76
CTLA4P16410 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.07□□□□□ -1.76
CTLA4P16410 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CTLA4P16410 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
CTLA4P16410 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CTLA4P16410 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.06□□□□□ -1.76
CTLA4P16410 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
CTLA4P16410 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.06□□□□□ -1.76
CTLA4P16410 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CTLA4P16410 AC010928.1-201ENST00000592477 1447 ntBASIC4.06□□□□□ -1.76
CTLA4P16410 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.06□□□□□ -1.76
CTLA4P16410 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CTLA4P16410 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.06□□□□□ -1.76
CTLA4P16410 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
CTLA4P16410 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CTLA4P16410 RNU1-20P-201ENST00000363314 162 ntBASIC4.06□□□□□ -1.76
CTLA4P16410 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.06□□□□□ -1.76
CTLA4P16410 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.06□□□□□ -1.76
CTLA4P16410 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.06□□□□□ -1.76
CTLA4P16410 RPS26P13-201ENST00000419030 330 ntBASIC4.06□□□□□ -1.76
CTLA4P16410 AC104837.2-201ENST00000427236 424 ntBASIC4.06□□□□□ -1.76
CTLA4P16410 ARL4AP3-201ENST00000441452 574 ntBASIC4.06□□□□□ -1.76
CTLA4P16410 RPS3AP53-201ENST00000454716 778 ntBASIC4.06□□□□□ -1.76
CTLA4P16410 RN7SL346P-201ENST00000491561 294 ntBASIC4.06□□□□□ -1.76
CTLA4P16410 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.06□□□□□ -1.76
CTLA4P16410 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.06□□□□□ -1.76
CTLA4P16410 AC007016.1-201ENST00000512110 244 ntBASIC4.06□□□□□ -1.76
CTLA4P16410 AL671862.1-201ENST00000515851 349 ntBASIC4.06□□□□□ -1.76
CTLA4P16410 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.06□□□□□ -1.76
CTLA4P16410 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.06□□□□□ -1.76
CTLA4P16410 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.06□□□□□ -1.76
CTLA4P16410 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.06□□□□□ -1.76
CTLA4P16410 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.06□□□□□ -1.76
CTLA4P16410 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.06□□□□□ -1.76
CTLA4P16410 AP001922.4-201ENST00000526967 290 ntBASIC4.06□□□□□ -1.76
CTLA4P16410 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CTLA4P16410 SETP1-201ENST00000556014 845 ntBASIC4.06□□□□□ -1.76
CTLA4P16410 UBE2FP2-201ENST00000566646 462 ntBASIC4.06□□□□□ -1.76
CTLA4P16410 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.06□□□□□ -1.76
CTLA4P16410 NPM1P45-201ENST00000583151 559 ntBASIC4.06□□□□□ -1.76
CTLA4P16410 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.06□□□□□ -1.76
CTLA4P16410 RPL7P50-201ENST00000600588 727 ntBASIC4.06□□□□□ -1.76
CTLA4P16410 QTRT1P1-201ENST00000604344 1078 ntBASIC4.06□□□□□ -1.76
CTLA4P16410 AC005084.1-201ENST00000605160 304 ntBASIC4.06□□□□□ -1.76
CTLA4P16410 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.06□□□□□ -1.76
CTLA4P16410 AL121890.2-201ENST00000617644 465 ntBASIC4.06□□□□□ -1.76
CTLA4P16410 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CTLA4P16410 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
CTLA4P16410 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.06□□□□□ -1.76
CTLA4P16410 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CTLA4P16410 SCN1A-220ENST00000641603 12506 ntBASIC4.06□□□□□ -1.76
CTLA4P16410 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.06□□□□□ -1.76
CTLA4P16410 SDAD1P1-202ENST00000524156 2051 ntBASIC4.06□□□□□ -1.76
CTLA4P16410 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
CTLA4P16410 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CTLA4P16410 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CTLA4P16410 AC093775.1-201ENST00000624154 1868 ntBASIC4.05□□□□□ -1.76
CTLA4P16410 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTLA4P16410 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.05□□□□□ -1.76
CTLA4P16410 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTLA4P16410 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTLA4P16410 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CTLA4P16410 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.05□□□□□ -1.76
CTLA4P16410 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CTLA4P16410 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CTLA4P16410 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CTLA4P16410 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.05□□□□□ -1.76
CTLA4P16410 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CTLA4P16410 RN7SKP199-201ENST00000410325 305 ntBASIC4.05□□□□□ -1.76
CTLA4P16410 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CTLA4P16410 CEACAMP8-201ENST00000413902 580 ntBASIC4.05□□□□□ -1.76
CTLA4P16410 OR6C64P-201ENST00000419708 825 ntBASIC4.05□□□□□ -1.76
CTLA4P16410 AC004448.2-201ENST00000422360 586 ntBASIC4.05□□□□□ -1.76
CTLA4P16410 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.05□□□□□ -1.76
CTLA4P16410 AC008072.1-201ENST00000434254 824 ntBASIC4.05□□□□□ -1.76
CTLA4P16410 VN1R54P-201ENST00000435210 1049 ntBASIC4.05□□□□□ -1.76
CTLA4P16410 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms