Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 SNRPFP1-201ENST00000414761 252 ntBASIC7.66□□□□□ -1.18
CFTRP13569 MFSD13B-201ENST00000420133 1290 ntBASIC7.66□□□□□ -1.18
CFTRP13569 AL162151.2-201ENST00000448875 158 ntBASIC7.66□□□□□ -1.18
CFTRP13569 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CFTRP13569 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC7.66□□□□□ -1.18
CFTRP13569 AC112484.5-201ENST00000624189 228 ntBASIC7.66□□□□□ -1.18
CFTRP13569 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CFTRP13569 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
CFTRP13569 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CFTRP13569 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC7.65□□□□□ -1.18
CFTRP13569 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC7.65□□□□□ -1.18
CFTRP13569 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CFTRP13569 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CFTRP13569 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
CFTRP13569 AL590806.1-201ENST00000415818 853 ntBASIC7.65□□□□□ -1.18
CFTRP13569 AC013429.2-201ENST00000418798 781 ntBASIC7.65□□□□□ -1.18
CFTRP13569 AC018644.1-201ENST00000429934 551 ntBASIC7.65□□□□□ -1.18
CFTRP13569 RPS29P7-201ENST00000439662 171 ntBASIC7.65□□□□□ -1.18
CFTRP13569 AC021660.1-201ENST00000465006 554 ntBASIC7.65□□□□□ -1.18
CFTRP13569 DSTNP2-201ENST00000504533 515 ntBASIC7.65□□□□□ -1.18
CFTRP13569 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC7.65□□□□□ -1.18
CFTRP13569 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC7.65□□□□□ -1.18
CFTRP13569 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC7.65□□□□□ -1.18
CFTRP13569 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC7.65□□□□□ -1.18
CFTRP13569 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC7.65□□□□□ -1.18
CFTRP13569 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
CFTRP13569 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC7.65□□□□□ -1.19
CFTRP13569 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.65□□□□□ -1.19
CFTRP13569 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC7.65□□□□□ -1.19
CFTRP13569 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
CFTRP13569 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC7.64□□□□□ -1.19
CFTRP13569 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
CFTRP13569 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
CFTRP13569 PCNPP4-201ENST00000414817 517 ntBASIC7.64□□□□□ -1.19
CFTRP13569 CKS1BP6-201ENST00000424932 240 ntBASIC7.64□□□□□ -1.19
CFTRP13569 AL157831.1-201ENST00000426134 473 ntBASIC7.64□□□□□ -1.19
CFTRP13569 HMGB3P5-201ENST00000428894 612 ntBASIC7.64□□□□□ -1.19
CFTRP13569 AC245028.2-201ENST00000458673 253 ntBASIC7.64□□□□□ -1.19
CFTRP13569 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC7.64□□□□□ -1.19
CFTRP13569 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC7.64□□□□□ -1.19
CFTRP13569 AL354984.3-201ENST00000604803 325 ntBASIC7.64□□□□□ -1.19
CFTRP13569 RNU4-89P-201ENST00000607443 133 ntBASIC7.64□□□□□ -1.19
CFTRP13569 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC7.64□□□□□ -1.19
CFTRP13569 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CFTRP13569 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC7.64□□□□□ -1.19
CFTRP13569 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
CFTRP13569 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CFTRP13569 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
CFTRP13569 DDX18P5-201ENST00000534547 1306 ntBASIC7.64□□□□□ -1.19
CFTRP13569 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CFTRP13569 AL133243.3-201ENST00000617415 3004 ntBASIC7.63□□□□□ -1.19
CFTRP13569 RNA5SP124-201ENST00000362739 110 ntBASIC7.63□□□□□ -1.19
CFTRP13569 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
CFTRP13569 PTMAP2-201ENST00000397627 327 ntBASIC7.63□□□□□ -1.19
CFTRP13569 AC007738.1-201ENST00000413892 348 ntBASIC7.63□□□□□ -1.19
CFTRP13569 RPL21P43-201ENST00000425440 472 ntBASIC7.63□□□□□ -1.19
CFTRP13569 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC7.63□□□□□ -1.19
CFTRP13569 AC105233.3-201ENST00000531125 744 ntBASIC7.63□□□□□ -1.19
CFTRP13569 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC7.63□□□□□ -1.19
CFTRP13569 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC7.63□□□□□ -1.19
CFTRP13569 AC006349.1-201ENST00000555526 235 ntBASIC7.63□□□□□ -1.19
CFTRP13569 AC007546.1-201ENST00000619452 559 ntBASIC7.63□□□□□ -1.19
CFTRP13569 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC7.63□□□□□ -1.19
CFTRP13569 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
CFTRP13569 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.63□□□□□ -1.19
CFTRP13569 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CFTRP13569 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
CFTRP13569 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CFTRP13569 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
CFTRP13569 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CFTRP13569 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC7.63□□□□□ -1.19
CFTRP13569 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC7.63□□□□□ -1.19
CFTRP13569 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CFTRP13569 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
CFTRP13569 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC7.63□□□□□ -1.19
CFTRP13569 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
CFTRP13569 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
CFTRP13569 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC7.63□□□□□ -1.19
CFTRP13569 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CFTRP13569 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC7.62□□□□□ -1.19
CFTRP13569 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CFTRP13569 MIR449B-201ENST00000384995 97 ntBASIC7.62□□□□□ -1.19
CFTRP13569 MT-RNR1-201ENST00000389680 954 ntBASIC7.62□□□□□ -1.19
CFTRP13569 RNU6ATAC-201ENST00000408749 126 ntBASIC7.62□□□□□ -1.19
CFTRP13569 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC7.62□□□□□ -1.19
CFTRP13569 RHEBP2-201ENST00000450289 600 ntBASIC7.62□□□□□ -1.19
CFTRP13569 AL592156.1-201ENST00000508758 304 ntBASIC7.62□□□□□ -1.19
CFTRP13569 AC099522.1-202ENST00000514718 367 ntBASIC7.62□□□□□ -1.19
CFTRP13569 DYNLL1P4-201ENST00000549314 266 ntBASIC7.62□□□□□ -1.19
CFTRP13569 AGGF1P6-201ENST00000569213 976 ntBASIC7.62□□□□□ -1.19
CFTRP13569 AP000648.2-201ENST00000624182 404 ntBASIC7.62□□□□□ -1.19
CFTRP13569 TCP11X1-202ENST00000622971 1372 ntBASIC7.62□□□□□ -1.19
CFTRP13569 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
CFTRP13569 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
CFTRP13569 AL445487.1-201ENST00000415694 1580 ntBASIC7.62□□□□□ -1.19
CFTRP13569 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
CFTRP13569 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CFTRP13569 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
CFTRP13569 AP005435.3-201ENST00000531260 3198 ntBASIC7.62□□□□□ -1.19
CFTRP13569 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms