Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
COL6A2P12110 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
COL6A2P12110 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.96□□□□□ -1.45
COL6A2P12110 AC027514.1-201ENST00000588561 1603 ntBASIC5.96□□□□□ -1.45
COL6A2P12110 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
COL6A2P12110 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
COL6A2P12110 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL6A2P12110 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL6A2P12110 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
COL6A2P12110 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL6A2P12110 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL6A2P12110 RNU6-1215P-201ENST00000384441 102 ntBASIC5.96□□□□□ -1.46
COL6A2P12110 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL6A2P12110 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.96□□□□□ -1.46
COL6A2P12110 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL6A2P12110 RNA5SP156-201ENST00000410250 110 ntBASIC5.96□□□□□ -1.46
COL6A2P12110 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.96□□□□□ -1.46
COL6A2P12110 DPRXP1-201ENST00000426312 460 ntBASIC5.96□□□□□ -1.46
COL6A2P12110 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.96□□□□□ -1.46
COL6A2P12110 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.96□□□□□ -1.46
COL6A2P12110 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.96□□□□□ -1.46
COL6A2P12110 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC5.96□□□□□ -1.46
COL6A2P12110 Z74696.2-201ENST00000436514 498 ntBASIC5.96□□□□□ -1.46
COL6A2P12110 RPL12P49-201ENST00000441100 121 ntBASIC5.96□□□□□ -1.46
COL6A2P12110 AL645936.1-201ENST00000441979 518 ntBASIC5.96□□□□□ -1.46
COL6A2P12110 AL031681.1-201ENST00000443304 400 ntBASIC5.96□□□□□ -1.46
COL6A2P12110 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC5.96□□□□□ -1.46
COL6A2P12110 MTND1P1-201ENST00000445453 368 ntBASIC5.96□□□□□ -1.46
COL6A2P12110 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
COL6A2P12110 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC5.96□□□□□ -1.46
COL6A2P12110 AL606490.1-201ENST00000452266 765 ntBASIC5.96□□□□□ -1.46
COL6A2P12110 SDC4P-201ENST00000453285 601 ntBASIC5.96□□□□□ -1.46
COL6A2P12110 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.96□□□□□ -1.46
COL6A2P12110 PNPLA4P1-201ENST00000458328 305 ntBASIC5.96□□□□□ -1.46
COL6A2P12110 RNU6-956P-201ENST00000458868 103 ntBASIC5.96□□□□□ -1.46
COL6A2P12110 NCOR1P1-202ENST00000486162 291 ntBASIC5.96□□□□□ -1.46
COL6A2P12110 AC109486.1-201ENST00000486833 374 ntBASIC5.96□□□□□ -1.46
COL6A2P12110 ACTG1P13-201ENST00000486987 1043 ntBASIC5.96□□□□□ -1.46
COL6A2P12110 AC111193.1-201ENST00000504097 155 ntBASIC5.96□□□□□ -1.46
COL6A2P12110 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL6A2P12110 AC010460.1-201ENST00000507087 466 ntBASIC5.96□□□□□ -1.46
COL6A2P12110 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.96□□□□□ -1.46
COL6A2P12110 AC079140.3-201ENST00000511111 550 ntBASIC5.96□□□□□ -1.46
COL6A2P12110 AC010285.3-201ENST00000511668 676 ntBASIC5.96□□□□□ -1.46
COL6A2P12110 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.96□□□□□ -1.46
COL6A2P12110 RN7SKP288-201ENST00000516227 268 ntBASIC5.96□□□□□ -1.46
COL6A2P12110 RNU6-416P-201ENST00000516265 103 ntBASIC5.96□□□□□ -1.46
COL6A2P12110 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC5.96□□□□□ -1.46
COL6A2P12110 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.96□□□□□ -1.46
COL6A2P12110 AC027026.1-201ENST00000532323 742 ntBASIC5.96□□□□□ -1.46
COL6A2P12110 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.96□□□□□ -1.46
COL6A2P12110 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC5.96□□□□□ -1.46
COL6A2P12110 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC5.96□□□□□ -1.46
COL6A2P12110 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.96□□□□□ -1.46
COL6A2P12110 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.96□□□□□ -1.46
COL6A2P12110 AC025857.2-201ENST00000602711 238 ntBASIC5.96□□□□□ -1.46
COL6A2P12110 AC067773.1-201ENST00000603284 1094 ntBASIC5.96□□□□□ -1.46
COL6A2P12110 AC131235.4-201ENST00000609288 620 ntBASIC5.96□□□□□ -1.46
COL6A2P12110 AC004948.1-201ENST00000609858 672 ntBASIC5.96□□□□□ -1.46
COL6A2P12110 AC100793.4-201ENST00000613683 429 ntBASIC5.96□□□□□ -1.46
COL6A2P12110 AL121873.1-201ENST00000616013 524 ntBASIC5.96□□□□□ -1.46
COL6A2P12110 AC116165.2-201ENST00000616705 206 ntBASIC5.96□□□□□ -1.46
COL6A2P12110 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL6A2P12110 SNX18P12-201ENST00000624821 759 ntBASIC5.96□□□□□ -1.46
COL6A2P12110 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.96□□□□□ -1.46
COL6A2P12110 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL6A2P12110 AC007603.3-201ENST00000636915 979 ntBASIC5.96□□□□□ -1.46
COL6A2P12110 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.96□□□□□ -1.46
COL6A2P12110 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL6A2P12110 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.96□□□□□ -1.46
COL6A2P12110 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL6A2P12110 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
COL6A2P12110 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.96□□□□□ -1.46
COL6A2P12110 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL6A2P12110 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
COL6A2P12110 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
COL6A2P12110 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL6A2P12110 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
COL6A2P12110 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL6A2P12110 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.96□□□□□ -1.46
COL6A2P12110 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
COL6A2P12110 AC022325.1-201ENST00000502748 2199 ntBASIC5.96□□□□□ -1.46
COL6A2P12110 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL6A2P12110 CDC27P2-201ENST00000425026 1922 ntBASIC5.95□□□□□ -1.46
COL6A2P12110 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
COL6A2P12110 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL6A2P12110 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
COL6A2P12110 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.95□□□□□ -1.46
COL6A2P12110 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.95□□□□□ -1.46
COL6A2P12110 Y_RNA.3-201ENST00000362331 103 ntBASIC5.95□□□□□ -1.46
COL6A2P12110 RNU4-21P-201ENST00000362802 126 ntBASIC5.95□□□□□ -1.46
COL6A2P12110 U3.4-201ENST00000363352 213 ntBASIC5.95□□□□□ -1.46
COL6A2P12110 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.95□□□□□ -1.46
COL6A2P12110 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
COL6A2P12110 Y_RNA.517-201ENST00000384551 106 ntBASIC5.95□□□□□ -1.46
COL6A2P12110 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
COL6A2P12110 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.95□□□□□ -1.46
COL6A2P12110 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
COL6A2P12110 PRELID1P1-201ENST00000403549 660 ntBASIC5.95□□□□□ -1.46
COL6A2P12110 AL096829.1-201ENST00000413677 457 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 183.7 ms