Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 SPATA2P1-201ENST00000431223 2055 ntBASIC4.26□□□□□ -1.73
UBCP0CG48 AC087190.4-201ENST00000574616 8334 ntBASIC4.26□□□□□ -1.73
UBCP0CG48 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
UBCP0CG48 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
UBCP0CG48 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
UBCP0CG48 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
UBCP0CG48 AC008758.3-201ENST00000507003 1829 ntBASIC4.26□□□□□ -1.73
UBCP0CG48 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
UBCP0CG48 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
UBCP0CG48 RNA5SP242-201ENST00000364171 118 ntBASIC4.26□□□□□ -1.73
UBCP0CG48 SNORD65-201ENST00000391079 73 ntBASIC4.26□□□□□ -1.73
UBCP0CG48 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.26□□□□□ -1.73
UBCP0CG48 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.26□□□□□ -1.73
UBCP0CG48 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.26□□□□□ -1.73
UBCP0CG48 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
UBCP0CG48 VN1R37P-201ENST00000419096 748 ntBASIC4.26□□□□□ -1.73
UBCP0CG48 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.26□□□□□ -1.73
UBCP0CG48 FABP7P1-201ENST00000424004 391 ntBASIC4.26□□□□□ -1.73
UBCP0CG48 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.26□□□□□ -1.73
UBCP0CG48 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.26□□□□□ -1.73
UBCP0CG48 CFL1P1-202ENST00000432948 411 ntBASIC4.26□□□□□ -1.73
UBCP0CG48 OR52B5P-201ENST00000435337 951 ntBASIC4.26□□□□□ -1.73
UBCP0CG48 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.26□□□□□ -1.73
UBCP0CG48 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.26□□□□□ -1.73
UBCP0CG48 RPL7AP52-201ENST00000458096 790 ntBASIC4.26□□□□□ -1.73
UBCP0CG48 STRADBP1-201ENST00000478954 1281 ntBASIC4.26□□□□□ -1.73
UBCP0CG48 AC116562.1-201ENST00000485355 781 ntBASIC4.26□□□□□ -1.73
UBCP0CG48 RN7SL97P-201ENST00000486780 299 ntBASIC4.26□□□□□ -1.73
UBCP0CG48 HMGN2P25-201ENST00000486956 268 ntBASIC4.26□□□□□ -1.73
UBCP0CG48 RN7SL244P-201ENST00000493405 297 ntBASIC4.26□□□□□ -1.73
UBCP0CG48 RN7SL558P-201ENST00000497468 299 ntBASIC4.26□□□□□ -1.73
UBCP0CG48 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.26□□□□□ -1.73
UBCP0CG48 AC113430.1-201ENST00000506872 718 ntBASIC4.26□□□□□ -1.73
UBCP0CG48 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.26□□□□□ -1.73
UBCP0CG48 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.26□□□□□ -1.73
UBCP0CG48 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.26□□□□□ -1.73
UBCP0CG48 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.26□□□□□ -1.73
UBCP0CG48 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.26□□□□□ -1.73
UBCP0CG48 AC125612.1-201ENST00000547580 377 ntBASIC4.26□□□□□ -1.73
UBCP0CG48 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.26□□□□□ -1.73
UBCP0CG48 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC4.26□□□□□ -1.73
UBCP0CG48 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.26□□□□□ -1.73
UBCP0CG48 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.26□□□□□ -1.73
UBCP0CG48 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.26□□□□□ -1.73
UBCP0CG48 IMMP1LP1-201ENST00000605170 488 ntBASIC4.26□□□□□ -1.73
UBCP0CG48 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.26□□□□□ -1.73
UBCP0CG48 AC116447.1-201ENST00000613153 453 ntBASIC4.26□□□□□ -1.73
UBCP0CG48 LINC00901.1-201ENST00000617252 152 ntBASIC4.26□□□□□ -1.73
UBCP0CG48 MIR6861-201ENST00000618657 64 ntBASIC4.26□□□□□ -1.73
UBCP0CG48 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.26□□□□□ -1.73
UBCP0CG48 OR52B5P-202ENST00000641118 1110 ntBASIC4.26□□□□□ -1.73
UBCP0CG48 MAPK10-304ENST00000641341 3984 ntBASIC4.26□□□□□ -1.73
UBCP0CG48 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
UBCP0CG48 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
UBCP0CG48 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
UBCP0CG48 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
UBCP0CG48 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
UBCP0CG48 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
UBCP0CG48 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
UBCP0CG48 OR14L1P-202ENST00000641545 3009 ntBASIC4.25□□□□□ -1.73
UBCP0CG48 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
UBCP0CG48 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
UBCP0CG48 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
UBCP0CG48 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
UBCP0CG48 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
UBCP0CG48 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
UBCP0CG48 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
UBCP0CG48 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.25□□□□□ -1.73
UBCP0CG48 AL139039.2-201ENST00000407436 479 ntBASIC4.25□□□□□ -1.73
UBCP0CG48 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.25□□□□□ -1.73
UBCP0CG48 CEACAMP8-201ENST00000413902 580 ntBASIC4.25□□□□□ -1.73
UBCP0CG48 NPM1P4-201ENST00000414095 812 ntBASIC4.25□□□□□ -1.73
UBCP0CG48 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.25□□□□□ -1.73
UBCP0CG48 EIF4EP1-201ENST00000422311 642 ntBASIC4.25□□□□□ -1.73
UBCP0CG48 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.25□□□□□ -1.73
UBCP0CG48 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.25□□□□□ -1.73
UBCP0CG48 RPS27P18-201ENST00000431701 247 ntBASIC4.25□□□□□ -1.73
UBCP0CG48 PA2G4P6-201ENST00000438325 1197 ntBASIC4.25□□□□□ -1.73
UBCP0CG48 AC004938.1-201ENST00000438468 308 ntBASIC4.25□□□□□ -1.73
UBCP0CG48 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.25□□□□□ -1.73
UBCP0CG48 ZNF733P-202ENST00000444809 1573 ntBASIC4.25□□□□□ -1.73
UBCP0CG48 AL389915.2-201ENST00000454576 441 ntBASIC4.25□□□□□ -1.73
UBCP0CG48 AL356390.1-201ENST00000455684 397 ntBASIC4.25□□□□□ -1.73
UBCP0CG48 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.25□□□□□ -1.73
UBCP0CG48 RN7SL222P-201ENST00000476452 299 ntBASIC4.25□□□□□ -1.73
UBCP0CG48 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.25□□□□□ -1.73
UBCP0CG48 AC024558.1-201ENST00000505008 528 ntBASIC4.25□□□□□ -1.73
UBCP0CG48 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.25□□□□□ -1.73
UBCP0CG48 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.25□□□□□ -1.73
UBCP0CG48 RNA5SP43-201ENST00000516559 110 ntBASIC4.25□□□□□ -1.73
UBCP0CG48 RNU6-709P-201ENST00000517257 104 ntBASIC4.25□□□□□ -1.73
UBCP0CG48 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
UBCP0CG48 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.25□□□□□ -1.73
UBCP0CG48 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.25□□□□□ -1.73
UBCP0CG48 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.25□□□□□ -1.73
UBCP0CG48 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
UBCP0CG48 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.25□□□□□ -1.73
UBCP0CG48 AC068714.1-201ENST00000559623 800 ntBASIC4.25□□□□□ -1.73
UBCP0CG48 AC011447.4-201ENST00000587562 111 ntBASIC4.25□□□□□ -1.73
UBCP0CG48 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms