Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.11□□□□□ -1.59
GPC4O75487 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.11□□□□□ -1.59
GPC4O75487 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.11□□□□□ -1.59
GPC4O75487 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.11□□□□□ -1.59
GPC4O75487 AC135068.12-201ENST00000637370 931 ntBASIC5.11□□□□□ -1.59
GPC4O75487 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
GPC4O75487 AL136520.1-201ENST00000600311 1322 ntBASIC5.11□□□□□ -1.59
GPC4O75487 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
GPC4O75487 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
GPC4O75487 PANDAR-201ENST00000629595 1506 ntBASIC5.11□□□□□ -1.59
GPC4O75487 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.11□□□□□ -1.59
GPC4O75487 RLIMP2-201ENST00000427891 1563 ntBASIC5.11□□□□□ -1.59
GPC4O75487 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
GPC4O75487 ZNF733P-202ENST00000444809 1573 ntBASIC5.11□□□□□ -1.59
GPC4O75487 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.11□□□□□ -1.59
GPC4O75487 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
GPC4O75487 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
GPC4O75487 NEAT1-202ENST00000501122 22743 ntBASIC5.11□□□□□ -1.59
GPC4O75487 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
GPC4O75487 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GPC4O75487 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.1□□□□□ -1.59
GPC4O75487 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.1□□□□□ -1.59
GPC4O75487 MAPK10-320ENST00000641462 6696 ntBASIC5.1□□□□□ -1.59
GPC4O75487 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GPC4O75487 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
GPC4O75487 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GPC4O75487 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GPC4O75487 DUTP5-201ENST00000406790 469 ntBASIC5.1□□□□□ -1.59
GPC4O75487 AL158825.1-201ENST00000414735 521 ntBASIC5.1□□□□□ -1.59
GPC4O75487 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.1□□□□□ -1.59
GPC4O75487 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC5.1□□□□□ -1.59
GPC4O75487 NANOGP4-201ENST00000427230 913 ntBASIC5.1□□□□□ -1.59
GPC4O75487 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.1□□□□□ -1.59
GPC4O75487 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.1□□□□□ -1.59
GPC4O75487 AC009238.2-201ENST00000431026 355 ntBASIC5.1□□□□□ -1.59
GPC4O75487 AP000936.3-201ENST00000438127 255 ntBASIC5.1□□□□□ -1.59
GPC4O75487 RPS29P10-201ENST00000439197 166 ntBASIC5.1□□□□□ -1.59
GPC4O75487 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.1□□□□□ -1.59
GPC4O75487 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.1□□□□□ -1.59
GPC4O75487 AL158053.1-201ENST00000441503 453 ntBASIC5.1□□□□□ -1.59
GPC4O75487 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.1□□□□□ -1.59
GPC4O75487 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.1□□□□□ -1.59
GPC4O75487 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GPC4O75487 RN7SL172P-201ENST00000460535 303 ntBASIC5.1□□□□□ -1.59
GPC4O75487 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.1□□□□□ -1.59
GPC4O75487 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.1□□□□□ -1.59
GPC4O75487 MTCO1P4-201ENST00000520516 1409 ntBASIC5.1□□□□□ -1.59
GPC4O75487 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.1□□□□□ -1.59
GPC4O75487 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.1□□□□□ -1.59
GPC4O75487 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.1□□□□□ -1.59
GPC4O75487 CIR1P1-201ENST00000524055 1133 ntBASIC5.1□□□□□ -1.59
GPC4O75487 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.1□□□□□ -1.59
GPC4O75487 MTND5P21-201ENST00000531961 522 ntBASIC5.1□□□□□ -1.59
GPC4O75487 OR8X1P-201ENST00000534542 869 ntBASIC5.1□□□□□ -1.59
GPC4O75487 AC024940.3-201ENST00000538551 316 ntBASIC5.1□□□□□ -1.59
GPC4O75487 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.1□□□□□ -1.59
GPC4O75487 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
GPC4O75487 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
GPC4O75487 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
GPC4O75487 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
GPC4O75487 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.1□□□□□ -1.59
GPC4O75487 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
GPC4O75487 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
GPC4O75487 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.1□□□□□ -1.59
GPC4O75487 SUMO2P15-201ENST00000604285 278 ntBASIC5.1□□□□□ -1.59
GPC4O75487 AP000894.4-201ENST00000610185 483 ntBASIC5.1□□□□□ -1.59
GPC4O75487 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.1□□□□□ -1.59
GPC4O75487 AP004607.9-201ENST00000618202 316 ntBASIC5.1□□□□□ -1.59
GPC4O75487 BX005214.3-202ENST00000619809 325 ntBASIC5.1□□□□□ -1.59
GPC4O75487 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.1□□□□□ -1.59
GPC4O75487 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC5.1□□□□□ -1.59
GPC4O75487 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.1□□□□□ -1.59
GPC4O75487 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
GPC4O75487 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
GPC4O75487 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GPC4O75487 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
GPC4O75487 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
GPC4O75487 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.1□□□□□ -1.59
GPC4O75487 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.1□□□□□ -1.59
GPC4O75487 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
GPC4O75487 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.09□□□□□ -1.59
GPC4O75487 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
GPC4O75487 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
GPC4O75487 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.09□□□□□ -1.59
GPC4O75487 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.09□□□□□ -1.59
GPC4O75487 MIR16-2-201ENST00000362117 81 ntBASIC5.09□□□□□ -1.59
GPC4O75487 SNORA17.1-201ENST00000362945 126 ntBASIC5.09□□□□□ -1.59
GPC4O75487 RNU6-171P-201ENST00000384354 107 ntBASIC5.09□□□□□ -1.59
GPC4O75487 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.09□□□□□ -1.59
GPC4O75487 TATDN1P1-201ENST00000414123 891 ntBASIC5.09□□□□□ -1.59
GPC4O75487 AC013410.2-201ENST00000422627 201 ntBASIC5.09□□□□□ -1.59
GPC4O75487 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.09□□□□□ -1.59
GPC4O75487 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.09□□□□□ -1.59
GPC4O75487 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.09□□□□□ -1.59
GPC4O75487 CYCSP11-201ENST00000436426 315 ntBASIC5.09□□□□□ -1.59
GPC4O75487 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC5.09□□□□□ -1.59
GPC4O75487 CNOT7P2-201ENST00000441051 832 ntBASIC5.09□□□□□ -1.59
GPC4O75487 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.09□□□□□ -1.59
GPC4O75487 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC5.09□□□□□ -1.59
GPC4O75487 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms