Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.92□□□□□ -1.62
RTCAO00442 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.92□□□□□ -1.62
RTCAO00442 AC006213.5-201ENST00000619673 288 ntBASIC4.92□□□□□ -1.62
RTCAO00442 AC000123.2-201ENST00000623124 461 ntBASIC4.92□□□□□ -1.62
RTCAO00442 AC135068.12-201ENST00000637370 931 ntBASIC4.92□□□□□ -1.62
RTCAO00442 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
RTCAO00442 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.92□□□□□ -1.62
RTCAO00442 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.92□□□□□ -1.62
RTCAO00442 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RTCAO00442 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
RTCAO00442 AC006042.3-201ENST00000454684 1469 ntBASIC4.92□□□□□ -1.62
RTCAO00442 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RTCAO00442 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.92□□□□□ -1.62
RTCAO00442 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RTCAO00442 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
RTCAO00442 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
RTCAO00442 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RTCAO00442 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
RTCAO00442 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.92□□□□□ -1.62
RTCAO00442 ADAM5-202ENST00000399789 1942 ntBASIC4.91□□□□□ -1.62
RTCAO00442 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
RTCAO00442 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
RTCAO00442 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RTCAO00442 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
RTCAO00442 AC002525.1-201ENST00000624392 1622 ntBASIC4.91□□□□□ -1.62
RTCAO00442 PABPC1P6-201ENST00000445594 1829 ntBASIC4.91□□□□□ -1.62
RTCAO00442 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RTCAO00442 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
RTCAO00442 SNORA27.3-201ENST00000364937 134 ntBASIC4.91□□□□□ -1.62
RTCAO00442 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RTCAO00442 MIR1182-201ENST00000408363 97 ntBASIC4.91□□□□□ -1.62
RTCAO00442 RN7SKP229-201ENST00000410465 302 ntBASIC4.91□□□□□ -1.62
RTCAO00442 RN7SKP126-201ENST00000411143 300 ntBASIC4.91□□□□□ -1.62
RTCAO00442 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.91□□□□□ -1.62
RTCAO00442 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.91□□□□□ -1.62
RTCAO00442 RPL30P3-201ENST00000424262 333 ntBASIC4.91□□□□□ -1.62
RTCAO00442 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.91□□□□□ -1.62
RTCAO00442 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
RTCAO00442 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
RTCAO00442 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.91□□□□□ -1.62
RTCAO00442 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.91□□□□□ -1.62
RTCAO00442 BX842559.2-201ENST00000451418 605 ntBASIC4.91□□□□□ -1.62
RTCAO00442 AURKAPS1-201ENST00000451805 1212 ntBASIC4.91□□□□□ -1.62
RTCAO00442 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.91□□□□□ -1.62
RTCAO00442 AC097173.1-201ENST00000505862 819 ntBASIC4.91□□□□□ -1.62
RTCAO00442 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.91□□□□□ -1.62
RTCAO00442 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.91□□□□□ -1.62
RTCAO00442 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.91□□□□□ -1.62
RTCAO00442 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.91□□□□□ -1.62
RTCAO00442 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.91□□□□□ -1.62
RTCAO00442 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.91□□□□□ -1.62
RTCAO00442 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
RTCAO00442 AC024940.3-201ENST00000538551 316 ntBASIC4.91□□□□□ -1.62
RTCAO00442 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RTCAO00442 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.91□□□□□ -1.62
RTCAO00442 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.91□□□□□ -1.62
RTCAO00442 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.91□□□□□ -1.62
RTCAO00442 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.91□□□□□ -1.62
RTCAO00442 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RTCAO00442 AC233702.9-201ENST00000581528 203 ntBASIC4.91□□□□□ -1.62
RTCAO00442 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.91□□□□□ -1.62
RTCAO00442 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.91□□□□□ -1.62
RTCAO00442 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.91□□□□□ -1.62
RTCAO00442 NF1P5-201ENST00000588287 448 ntBASIC4.91□□□□□ -1.62
RTCAO00442 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.91□□□□□ -1.62
RTCAO00442 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.91□□□□□ -1.62
RTCAO00442 AC110792.4-201ENST00000609843 298 ntBASIC4.91□□□□□ -1.62
RTCAO00442 AC126915.2-201ENST00000610957 190 ntBASIC4.91□□□□□ -1.62
RTCAO00442 AL512624.1-201ENST00000613638 469 ntBASIC4.91□□□□□ -1.62
RTCAO00442 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.91□□□□□ -1.62
RTCAO00442 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.91□□□□□ -1.62
RTCAO00442 CR392039.4-201ENST00000624968 501 ntBASIC4.91□□□□□ -1.62
RTCAO00442 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.91□□□□□ -1.62
RTCAO00442 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.91□□□□□ -1.62
RTCAO00442 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RTCAO00442 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.91□□□□□ -1.62
RTCAO00442 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RTCAO00442 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
RTCAO00442 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RTCAO00442 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
RTCAO00442 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
RTCAO00442 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RTCAO00442 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.9□□□□□ -1.62
RTCAO00442 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RTCAO00442 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RTCAO00442 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RTCAO00442 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RTCAO00442 RNU6-452P-201ENST00000384406 107 ntBASIC4.9□□□□□ -1.63
RTCAO00442 ATP5F1P2-201ENST00000398143 760 ntBASIC4.9□□□□□ -1.63
RTCAO00442 RPL21P67-201ENST00000402896 478 ntBASIC4.9□□□□□ -1.63
RTCAO00442 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
RTCAO00442 AL035079.1-201ENST00000405210 287 ntBASIC4.9□□□□□ -1.63
RTCAO00442 AL590290.1-201ENST00000405336 380 ntBASIC4.9□□□□□ -1.63
RTCAO00442 AL390316.1-201ENST00000406279 553 ntBASIC4.9□□□□□ -1.63
RTCAO00442 USP9YP19-201ENST00000412165 485 ntBASIC4.9□□□□□ -1.63
RTCAO00442 COX5BP7-201ENST00000414780 274 ntBASIC4.9□□□□□ -1.63
RTCAO00442 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RTCAO00442 GAPDHP49-201ENST00000421421 961 ntBASIC4.9□□□□□ -1.63
RTCAO00442 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
RTCAO00442 RWDD4P2-201ENST00000426392 563 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms