Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AC125612.1-201ENST00000547580 377 ntBASIC4.72□□□□□ -1.65
SLC28A1O00337 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC28A1O00337 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC28A1O00337 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.72□□□□□ -1.65
SLC28A1O00337 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC28A1O00337 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC28A1O00337 AC097505.1-201ENST00000610199 565 ntBASIC4.72□□□□□ -1.65
SLC28A1O00337 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
SLC28A1O00337 AL354696.1-201ENST00000614652 497 ntBASIC4.72□□□□□ -1.65
SLC28A1O00337 AC003001.2-201ENST00000616294 831 ntBASIC4.72□□□□□ -1.65
SLC28A1O00337 AP001005.3-201ENST00000622049 129 ntBASIC4.72□□□□□ -1.65
SLC28A1O00337 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC28A1O00337 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
SLC28A1O00337 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.72□□□□□ -1.65
SLC28A1O00337 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.72□□□□□ -1.65
SLC28A1O00337 AC007382.1-201ENST00000624376 2618 ntBASIC4.72□□□□□ -1.65
SLC28A1O00337 AC008758.3-201ENST00000507003 1829 ntBASIC4.72□□□□□ -1.65
SLC28A1O00337 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SLC28A1O00337 MAPK10-349ENST00000641767 3661 ntBASIC4.71□□□□□ -1.65
SLC28A1O00337 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.65
SLC28A1O00337 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.65
SLC28A1O00337 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.71□□□□□ -1.65
SLC28A1O00337 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
SLC28A1O00337 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.65
SLC28A1O00337 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.71□□□□□ -1.66
SLC28A1O00337 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
SLC28A1O00337 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.71□□□□□ -1.66
SLC28A1O00337 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.71□□□□□ -1.66
SLC28A1O00337 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SLC28A1O00337 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SLC28A1O00337 SNURFL-201ENST00000309296 343 ntBASIC4.71□□□□□ -1.66
SLC28A1O00337 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SLC28A1O00337 RNU6-225P-201ENST00000384613 103 ntBASIC4.71□□□□□ -1.66
SLC28A1O00337 AC233289.1-201ENST00000403700 508 ntBASIC4.71□□□□□ -1.66
SLC28A1O00337 AL592291.1-201ENST00000403830 352 ntBASIC4.71□□□□□ -1.66
SLC28A1O00337 U3.35-201ENST00000408405 208 ntBASIC4.71□□□□□ -1.66
SLC28A1O00337 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SLC28A1O00337 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC28A1O00337 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.71□□□□□ -1.66
SLC28A1O00337 FABP7P2-201ENST00000429946 379 ntBASIC4.71□□□□□ -1.66
SLC28A1O00337 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC28A1O00337 AC092447.2-201ENST00000435487 669 ntBASIC4.71□□□□□ -1.66
SLC28A1O00337 AC004938.1-201ENST00000438468 308 ntBASIC4.71□□□□□ -1.66
SLC28A1O00337 RPL34P20-201ENST00000442771 351 ntBASIC4.71□□□□□ -1.66
SLC28A1O00337 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC28A1O00337 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.71□□□□□ -1.66
SLC28A1O00337 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.71□□□□□ -1.66
SLC28A1O00337 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC28A1O00337 RN7SL172P-201ENST00000460535 303 ntBASIC4.71□□□□□ -1.66
SLC28A1O00337 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.71□□□□□ -1.66
SLC28A1O00337 RN7SL174P-201ENST00000475578 289 ntBASIC4.71□□□□□ -1.66
SLC28A1O00337 RN7SL222P-201ENST00000476452 299 ntBASIC4.71□□□□□ -1.66
SLC28A1O00337 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC28A1O00337 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.71□□□□□ -1.66
SLC28A1O00337 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC28A1O00337 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC4.71□□□□□ -1.66
SLC28A1O00337 RNA5SP43-201ENST00000516559 110 ntBASIC4.71□□□□□ -1.66
SLC28A1O00337 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC28A1O00337 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC28A1O00337 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC28A1O00337 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.71□□□□□ -1.66
SLC28A1O00337 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC4.71□□□□□ -1.66
SLC28A1O00337 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC28A1O00337 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC28A1O00337 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC28A1O00337 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC28A1O00337 AC004825.1-201ENST00000555068 586 ntBASIC4.71□□□□□ -1.66
SLC28A1O00337 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.71□□□□□ -1.66
SLC28A1O00337 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.71□□□□□ -1.66
SLC28A1O00337 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.71□□□□□ -1.66
SLC28A1O00337 AC124856.1-201ENST00000600819 896 ntBASIC4.71□□□□□ -1.66
SLC28A1O00337 MTCO3P22-201ENST00000603219 784 ntBASIC4.71□□□□□ -1.66
SLC28A1O00337 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.71□□□□□ -1.66
SLC28A1O00337 CR589904.2-201ENST00000612533 440 ntBASIC4.71□□□□□ -1.66
SLC28A1O00337 AC006453.5-201ENST00000636451 619 ntBASIC4.71□□□□□ -1.66
SLC28A1O00337 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
SLC28A1O00337 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.71□□□□□ -1.66
SLC28A1O00337 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
SLC28A1O00337 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
SLC28A1O00337 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SLC28A1O00337 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
SLC28A1O00337 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SLC28A1O00337 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.7□□□□□ -1.66
SLC28A1O00337 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SLC28A1O00337 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SLC28A1O00337 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SLC28A1O00337 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SLC28A1O00337 RNA5SP435-201ENST00000364044 108 ntBASIC4.7□□□□□ -1.66
SLC28A1O00337 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SLC28A1O00337 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SLC28A1O00337 AL021331.1-201ENST00000402817 582 ntBASIC4.7□□□□□ -1.66
SLC28A1O00337 U3.36-201ENST00000408418 213 ntBASIC4.7□□□□□ -1.66
SLC28A1O00337 AC012519.1-201ENST00000424588 610 ntBASIC4.7□□□□□ -1.66
SLC28A1O00337 RPS26P2-201ENST00000440331 348 ntBASIC4.7□□□□□ -1.66
SLC28A1O00337 MTND5P8-201ENST00000449817 1083 ntBASIC4.7□□□□□ -1.66
SLC28A1O00337 RPL10P17-201ENST00000453852 316 ntBASIC4.7□□□□□ -1.66
SLC28A1O00337 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.7□□□□□ -1.66
SLC28A1O00337 AL445433.1-201ENST00000457507 257 ntBASIC4.7□□□□□ -1.66
SLC28A1O00337 MTCO1P31-201ENST00000506355 492 ntBASIC4.7□□□□□ -1.66
SLC28A1O00337 AC108120.2-201ENST00000512973 294 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms