Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 BNIP3P23-201ENST00000599655 511 ntBASIC5.79□□□□□ -1.48
SHISA3A0PJX4 NRBF2P5-201ENST00000603087 788 ntBASIC5.79□□□□□ -1.48
SHISA3A0PJX4 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 PISRT1-201ENST00000626175 531 ntBASIC5.79□□□□□ -1.48
SHISA3A0PJX4 PRPS1L1-202ENST00000638645 957 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 AC005261.2-201ENST00000593427 4258 ntBASIC5.79□□□□□ -1.48
SHISA3A0PJX4 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHISA3A0PJX4 AC005725.1-201ENST00000577346 2607 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 TUBBP10-201ENST00000427668 1301 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 ZNF880-202ENST00000422689 2230 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 OR4A15-201ENST00000314706 1035 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 SNORA30B-201ENST00000365319 129 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 RNU1-55P-201ENST00000365510 158 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 PPIAP26-201ENST00000377951 522 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 RPS3AP36-201ENST00000398190 775 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AL356776.1-201ENST00000406574 447 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 RN7SKP236-201ENST00000410635 284 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 RPS6P23-201ENST00000413224 722 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 RPS3AP9-201ENST00000417027 792 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 USP9YP20-201ENST00000419224 558 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 ZNF90P2-204ENST00000419323 1075 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AC009961.2-201ENST00000435771 251 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 MTND5P14-201ENST00000441481 1267 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 CALM1P1-201ENST00000442082 433 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AC097493.1-201ENST00000463958 372 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 RPS4XP17-201ENST00000479057 754 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AC106872.3-201ENST00000495104 446 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AC012170.1-201ENST00000495139 359 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AC018710.1-201ENST00000506509 158 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 RNA5SP518-201ENST00000515957 119 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AP001803.1-201ENST00000525668 147 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 MTND1P35-201ENST00000526739 508 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 FAM92A1P1-201ENST00000528023 890 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AL442663.2-201ENST00000554385 511 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AC022884.3-201ENST00000579571 248 ntBASIC5.78□□□□□ -1.48
SHISA3A0PJX4 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC5.78□□□□□ -1.48
SHISA3A0PJX4 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms