Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC243756.2-201ENST00000618406 463 ntBASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 CR1-204ENST00000367052 7469 ntTSL 5 BASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 CR1-205ENST00000367053 7469 ntTSL 5 BASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PDZRN3Q9UPQ7 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 AL391261.1-201ENST00000555712 1479 ntBASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 Y_RNA.307-201ENST00000365022 117 ntBASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 MIR568-201ENST00000385036 95 ntBASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 MIR559-201ENST00000385188 96 ntBASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 AC007068.1-201ENST00000396690 844 ntBASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 ST13P16-201ENST00000401760 781 ntBASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 RNU6-847P-201ENST00000411115 108 ntBASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 AC008173.1-201ENST00000418901 264 ntBASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 RPL31P54-201ENST00000429803 370 ntBASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 AC108479.1-201ENST00000431142 427 ntBASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 AL136455.1-201ENST00000441083 1240 ntBASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 RPS24P6-201ENST00000452670 400 ntBASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 RN7SL254P-201ENST00000460609 284 ntBASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 AC093278.1-201ENST00000494700 600 ntBASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 RNU6-789P-201ENST00000517105 102 ntBASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 AC073581.1-201ENST00000519036 575 ntBASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 AL157687.1-201ENST00000554853 619 ntBASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 AC026956.1-201ENST00000558741 396 ntBASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 AC092718.4-201ENST00000566639 716 ntBASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 AC245052.7-201ENST00000601161 359 ntBASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 AL021368.3-201ENST00000607119 578 ntBASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 AADACL3-201ENST00000359318 3662 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
PDZRN3Q9UPQ7 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
PDZRN3Q9UPQ7 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
PDZRN3Q9UPQ7 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
PDZRN3Q9UPQ7 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PDZRN3Q9UPQ7 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC8.4□□□□□ -1.06
PDZRN3Q9UPQ7 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PDZRN3Q9UPQ7 PRNCR1-201ENST00000635449 12727 ntBASIC8.4□□□□□ -1.06
PDZRN3Q9UPQ7 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
PDZRN3Q9UPQ7 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
PDZRN3Q9UPQ7 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
PDZRN3Q9UPQ7 CALM2P3-201ENST00000400429 449 ntBASIC8.4□□□□□ -1.06
PDZRN3Q9UPQ7 AL356432.1-201ENST00000405809 419 ntBASIC8.4□□□□□ -1.06
PDZRN3Q9UPQ7 RPA3-204ENST00000406109 434 ntTSL 3 BASIC8.4□□□□□ -1.06
PDZRN3Q9UPQ7 SNORA11B-201ENST00000408175 129 ntBASIC8.4□□□□□ -1.06
PDZRN3Q9UPQ7 HSD17B7P1-201ENST00000412419 1017 ntBASIC8.4□□□□□ -1.06
PDZRN3Q9UPQ7 RPS7P15-201ENST00000415804 584 ntBASIC8.4□□□□□ -1.06
PDZRN3Q9UPQ7 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC8.4□□□□□ -1.06
PDZRN3Q9UPQ7 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC8.4□□□□□ -1.06
PDZRN3Q9UPQ7 ARPC3P5-201ENST00000448802 534 ntBASIC8.4□□□□□ -1.06
PDZRN3Q9UPQ7 MTND5P22-201ENST00000458380 195 ntBASIC8.4□□□□□ -1.06
PDZRN3Q9UPQ7 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC8.4□□□□□ -1.06
PDZRN3Q9UPQ7 AC113347.3-201ENST00000509113 148 ntBASIC8.4□□□□□ -1.06
PDZRN3Q9UPQ7 AF131216.2-201ENST00000512316 564 ntBASIC8.4□□□□□ -1.06
PDZRN3Q9UPQ7 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC8.4□□□□□ -1.06
PDZRN3Q9UPQ7 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC8.4□□□□□ -1.06
PDZRN3Q9UPQ7 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC8.4□□□□□ -1.06
PDZRN3Q9UPQ7 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC8.4□□□□□ -1.06
PDZRN3Q9UPQ7 AC092807.2-201ENST00000609367 243 ntBASIC8.4□□□□□ -1.06
PDZRN3Q9UPQ7 AC009248.2-201ENST00000619826 254 ntBASIC8.4□□□□□ -1.06
PDZRN3Q9UPQ7 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PDZRN3Q9UPQ7 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.06
PDZRN3Q9UPQ7 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
PDZRN3Q9UPQ7 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC8.4□□□□□ -1.06
PDZRN3Q9UPQ7 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.07
PDZRN3Q9UPQ7 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.07
PDZRN3Q9UPQ7 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC8.4□□□□□ -1.07
PDZRN3Q9UPQ7 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms