Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 COX6CP18-201ENST00000448769 222 ntBASIC6.93□□□□□ -1.3
CNTN3Q9P232 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.93□□□□□ -1.3
CNTN3Q9P232 AP000797.1-201ENST00000478870 387 ntBASIC6.93□□□□□ -1.3
CNTN3Q9P232 AC092824.1-201ENST00000483524 576 ntBASIC6.93□□□□□ -1.3
CNTN3Q9P232 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CNTN3Q9P232 AC010342.1-201ENST00000514047 877 ntBASIC6.93□□□□□ -1.3
CNTN3Q9P232 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC6.93□□□□□ -1.3
CNTN3Q9P232 IGHV4-55-201ENST00000520889 368 ntBASIC6.93□□□□□ -1.3
CNTN3Q9P232 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.93□□□□□ -1.3
CNTN3Q9P232 AC087276.1-201ENST00000529659 480 ntBASIC6.93□□□□□ -1.3
CNTN3Q9P232 AC137768.1-201ENST00000549998 553 ntBASIC6.93□□□□□ -1.3
CNTN3Q9P232 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.93□□□□□ -1.3
CNTN3Q9P232 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC6.93□□□□□ -1.3
CNTN3Q9P232 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.93□□□□□ -1.3
CNTN3Q9P232 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC6.93□□□□□ -1.3
CNTN3Q9P232 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC6.93□□□□□ -1.3
CNTN3Q9P232 SMIM12P1-201ENST00000603004 274 ntBASIC6.93□□□□□ -1.3
CNTN3Q9P232 AC005034.5-201ENST00000604219 466 ntBASIC6.93□□□□□ -1.3
CNTN3Q9P232 AC087045.1-201ENST00000605856 382 ntBASIC6.93□□□□□ -1.3
CNTN3Q9P232 AC009994.1-201ENST00000606889 253 ntBASIC6.93□□□□□ -1.3
CNTN3Q9P232 SNORA74.4-201ENST00000607595 199 ntBASIC6.93□□□□□ -1.3
CNTN3Q9P232 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.93□□□□□ -1.3
CNTN3Q9P232 AC005332.6-201ENST00000613178 446 ntBASIC6.93□□□□□ -1.3
CNTN3Q9P232 MIR6721-201ENST00000617181 87 ntBASIC6.93□□□□□ -1.3
CNTN3Q9P232 AC011504.1-201ENST00000623331 4103 ntBASIC6.93□□□□□ -1.3
CNTN3Q9P232 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
CNTN3Q9P232 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.93□□□□□ -1.3
CNTN3Q9P232 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CNTN3Q9P232 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.93□□□□□ -1.3
CNTN3Q9P232 AL136984.1-201ENST00000607611 1893 ntBASIC6.93□□□□□ -1.3
CNTN3Q9P232 AC022034.1-201ENST00000512867 2156 ntBASIC6.93□□□□□ -1.3
CNTN3Q9P232 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
CNTN3Q9P232 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.93□□□□□ -1.3
CNTN3Q9P232 RPS4XP5-202ENST00000449995 1334 ntBASIC6.93□□□□□ -1.3
CNTN3Q9P232 UGT2B26P-201ENST00000508672 1613 ntBASIC6.93□□□□□ -1.3
CNTN3Q9P232 JPX-212ENST00000639185 9658 ntTSL 5 BASIC6.93□□□□□ -1.3
CNTN3Q9P232 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CNTN3Q9P232 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CNTN3Q9P232 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CNTN3Q9P232 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
CNTN3Q9P232 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.93□□□□□ -1.3
CNTN3Q9P232 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.93□□□□□ -1.3
CNTN3Q9P232 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CNTN3Q9P232 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CNTN3Q9P232 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CNTN3Q9P232 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CNTN3Q9P232 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.92□□□□□ -1.3
CNTN3Q9P232 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.92□□□□□ -1.3
CNTN3Q9P232 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.92□□□□□ -1.3
CNTN3Q9P232 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
CNTN3Q9P232 AC130360.2-201ENST00000533477 1556 ntBASIC6.92□□□□□ -1.3
CNTN3Q9P232 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.92□□□□□ -1.3
CNTN3Q9P232 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CNTN3Q9P232 CBX3P1-201ENST00000325243 554 ntBASIC6.92□□□□□ -1.3
CNTN3Q9P232 RNU1-65P-201ENST00000363919 148 ntBASIC6.92□□□□□ -1.3
CNTN3Q9P232 Y_RNA.372-201ENST00000365599 102 ntBASIC6.92□□□□□ -1.3
CNTN3Q9P232 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CNTN3Q9P232 RNU6-729P-201ENST00000384399 107 ntBASIC6.92□□□□□ -1.3
CNTN3Q9P232 FCF1P10-201ENST00000407590 479 ntBASIC6.92□□□□□ -1.3
CNTN3Q9P232 AL139805.1-201ENST00000407837 289 ntBASIC6.92□□□□□ -1.3
CNTN3Q9P232 AL035422.1-201ENST00000414193 397 ntBASIC6.92□□□□□ -1.3
CNTN3Q9P232 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.92□□□□□ -1.3
CNTN3Q9P232 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.92□□□□□ -1.3
CNTN3Q9P232 LINC00993-201ENST00000420453 540 ntBASIC6.92□□□□□ -1.3
CNTN3Q9P232 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.92□□□□□ -1.3
CNTN3Q9P232 RPL23AP4-201ENST00000427757 463 ntBASIC6.92□□□□□ -1.3
CNTN3Q9P232 AC007559.1-201ENST00000428736 355 ntBASIC6.92□□□□□ -1.3
CNTN3Q9P232 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC6.92□□□□□ -1.3
CNTN3Q9P232 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC6.92□□□□□ -1.3
CNTN3Q9P232 MTND4LP10-201ENST00000435146 291 ntBASIC6.92□□□□□ -1.3
CNTN3Q9P232 AC244505.5-201ENST00000443639 207 ntBASIC6.92□□□□□ -1.3
CNTN3Q9P232 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6.92□□□□□ -1.3
CNTN3Q9P232 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.92□□□□□ -1.3
CNTN3Q9P232 DNAJB5P1-201ENST00000454004 806 ntBASIC6.92□□□□□ -1.3
CNTN3Q9P232 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.92□□□□□ -1.3
CNTN3Q9P232 ARPC3P2-201ENST00000457786 533 ntBASIC6.92□□□□□ -1.3
CNTN3Q9P232 AP000852.1-201ENST00000472460 573 ntBASIC6.92□□□□□ -1.3
CNTN3Q9P232 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.92□□□□□ -1.3
CNTN3Q9P232 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.92□□□□□ -1.3
CNTN3Q9P232 RPL12P31-201ENST00000478433 450 ntBASIC6.92□□□□□ -1.3
CNTN3Q9P232 LARP1BP2-201ENST00000486594 519 ntBASIC6.92□□□□□ -1.3
CNTN3Q9P232 RPL7P38-201ENST00000488396 739 ntBASIC6.92□□□□□ -1.3
CNTN3Q9P232 AC109462.1-201ENST00000491087 368 ntBASIC6.92□□□□□ -1.3
CNTN3Q9P232 RPL37P23-201ENST00000492641 294 ntBASIC6.92□□□□□ -1.3
CNTN3Q9P232 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CNTN3Q9P232 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.92□□□□□ -1.3
CNTN3Q9P232 AC091965.3-201ENST00000506236 208 ntBASIC6.92□□□□□ -1.3
CNTN3Q9P232 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC6.92□□□□□ -1.3
CNTN3Q9P232 ARL2BPP6-201ENST00000512757 439 ntBASIC6.92□□□□□ -1.3
CNTN3Q9P232 ZNF519P4-201ENST00000514008 125 ntBASIC6.92□□□□□ -1.3
CNTN3Q9P232 RNU6-507P-201ENST00000516045 100 ntBASIC6.92□□□□□ -1.3
CNTN3Q9P232 RNA5SP206-201ENST00000516703 121 ntBASIC6.92□□□□□ -1.3
CNTN3Q9P232 RNA5SP441-201ENST00000516809 88 ntBASIC6.92□□□□□ -1.3
CNTN3Q9P232 AC239860.2-201ENST00000525886 270 ntBASIC6.92□□□□□ -1.3
CNTN3Q9P232 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC6.92□□□□□ -1.3
CNTN3Q9P232 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
CNTN3Q9P232 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC6.92□□□□□ -1.3
CNTN3Q9P232 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC6.92□□□□□ -1.3
CNTN3Q9P232 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CNTN3Q9P232 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms