Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 RN7SL711P-201ENST00000579731 299 ntBASIC9.13□□□□□ -0.95
RTN4Q9NQC3 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
RTN4Q9NQC3 AC010525.2-201ENST00000590920 195 ntBASIC9.13□□□□□ -0.95
RTN4Q9NQC3 AC136475.8-201ENST00000602809 386 ntTSL 5 BASIC9.13□□□□□ -0.95
RTN4Q9NQC3 AC011894.1-201ENST00000603255 456 ntBASIC9.13□□□□□ -0.95
RTN4Q9NQC3 AC004840.2-201ENST00000603368 285 ntBASIC9.13□□□□□ -0.95
RTN4Q9NQC3 HNRNPA3P9-201ENST00000604913 979 ntBASIC9.13□□□□□ -0.95
RTN4Q9NQC3 AL008729.2-201ENST00000606393 473 ntBASIC9.13□□□□□ -0.95
RTN4Q9NQC3 SNCA-212ENST00000611107 297 ntTSL 5 BASIC9.13□□□□□ -0.95
RTN4Q9NQC3 Metazoa_SRP.115-201ENST00000619303 284 ntBASIC9.13□□□□□ -0.95
RTN4Q9NQC3 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC9.13□□□□□ -0.95
RTN4Q9NQC3 AC009120.2-201ENST00000620711 522 ntTSL 3 BASIC9.13□□□□□ -0.95
RTN4Q9NQC3 MTCO1P9-201ENST00000505577 1534 ntBASIC9.13□□□□□ -0.95
RTN4Q9NQC3 ZNF728-201ENST00000594710 2015 ntAPPRIS P1 TSL 3 BASIC9.13□□□□□ -0.95
RTN4Q9NQC3 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC9.13□□□□□ -0.95
RTN4Q9NQC3 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
RTN4Q9NQC3 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC9.13□□□□□ -0.95
RTN4Q9NQC3 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
RTN4Q9NQC3 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC9.13□□□□□ -0.95
RTN4Q9NQC3 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC9.13□□□□□ -0.95
RTN4Q9NQC3 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
RTN4Q9NQC3 AC125232.1-201ENST00000452554 1408 ntBASIC9.13□□□□□ -0.95
RTN4Q9NQC3 SEC62-207ENST00000480708 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
RTN4Q9NQC3 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
RTN4Q9NQC3 AL353796.1-201ENST00000561542 3241 ntBASIC9.12□□□□□ -0.95
RTN4Q9NQC3 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 PTGS2-201ENST00000367468 4514 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 OSCP1-202ENST00000354267 767 ntTSL 5 BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 SNORA51.2-201ENST00000364595 132 ntBASIC9.12□□□□□ -0.95
RTN4Q9NQC3 SNORD81.2-201ENST00000365153 76 ntBASIC9.12□□□□□ -0.95
RTN4Q9NQC3 SCNM1-201ENST00000368902 869 ntTSL 2 BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 AL731892.1-201ENST00000437364 1192 ntBASIC9.12□□□□□ -0.95
RTN4Q9NQC3 AP000350.3-201ENST00000440099 289 ntBASIC9.12□□□□□ -0.95
RTN4Q9NQC3 CD59-206ENST00000445143 825 ntAPPRIS P2 TSL 3 BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 CACYBPP2-201ENST00000453625 678 ntBASIC9.12□□□□□ -0.95
RTN4Q9NQC3 MYB-AS1-201ENST00000455534 449 ntTSL 2 BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 RNU7-182P-201ENST00000459009 62 ntBASIC9.12□□□□□ -0.95
RTN4Q9NQC3 AC021074.2-201ENST00000468434 172 ntBASIC9.12□□□□□ -0.95
RTN4Q9NQC3 AP001318.1-201ENST00000476981 321 ntBASIC9.12□□□□□ -0.95
RTN4Q9NQC3 RPL23AP10-201ENST00000489946 466 ntBASIC9.12□□□□□ -0.95
RTN4Q9NQC3 TDGF1P3-201ENST00000493351 567 ntBASIC9.12□□□□□ -0.95
RTN4Q9NQC3 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 AC008496.1-201ENST00000509131 295 ntBASIC9.12□□□□□ -0.95
RTN4Q9NQC3 SNORA19.2-201ENST00000516013 114 ntBASIC9.12□□□□□ -0.95
RTN4Q9NQC3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 AC109635.2-201ENST00000525654 524 ntTSL 3 BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 OR5B19P-201ENST00000531766 928 ntBASIC9.12□□□□□ -0.95
RTN4Q9NQC3 AC024901.1-201ENST00000535764 718 ntTSL 3 BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 AC079598.4-201ENST00000549647 265 ntBASIC9.12□□□□□ -0.95
RTN4Q9NQC3 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 AC004828.1-201ENST00000555303 654 ntTSL 3 BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 GNG2-215ENST00000557376 573 ntTSL 4 BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 AC005341.1-201ENST00000571086 708 ntBASIC9.12□□□□□ -0.95
RTN4Q9NQC3 AC005668.1-201ENST00000571142 476 ntBASIC9.12□□□□□ -0.95
RTN4Q9NQC3 AC040162.2-201ENST00000573092 157 ntBASIC9.12□□□□□ -0.95
RTN4Q9NQC3 GATA6-AS1-201ENST00000579431 481 ntTSL 3 BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 AL451085.1-201ENST00000604546 690 ntBASIC9.12□□□□□ -0.95
RTN4Q9NQC3 AC113194.1-201ENST00000606037 500 ntBASIC9.12□□□□□ -0.95
RTN4Q9NQC3 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 KCNQ1OT1_2.1-201ENST00000619507 196 ntBASIC9.12□□□□□ -0.95
RTN4Q9NQC3 Metazoa_SRP.45-201ENST00000620896 299 ntBASIC9.12□□□□□ -0.95
RTN4Q9NQC3 LINC01002-228ENST00000633402 565 ntTSL 5 BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 MPP7-203ENST00000375732 5063 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 ACSL4-204ENST00000469796 5225 ntAPPRIS P4 TSL 5 BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 PIGN-225ENST00000638435 4382 ntTSL 5 BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 HCG18-238ENST00000449544 4262 ntTSL 2 BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
RTN4Q9NQC3 AC108467.2-201ENST00000617640 1597 ntBASIC9.12□□□□□ -0.95
RTN4Q9NQC3 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 ACO1-201ENST00000309951 7466 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms