Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 RNU1-108P-201ENST00000362556 161 ntBASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 AC019155.1-201ENST00000382242 574 ntBASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 MIR921-201ENST00000401133 56 ntBASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 AL355433.1-201ENST00000422804 300 ntBASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 RPL23AP4-201ENST00000427757 463 ntBASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 MTND2P2-201ENST00000434633 945 ntBASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 AC004938.1-201ENST00000438468 308 ntBASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 AC245047.2-201ENST00000441060 530 ntBASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 HMGB1P4-201ENST00000455362 567 ntBASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 COPS8P2-201ENST00000473228 627 ntBASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 UBA52P7-201ENST00000486088 380 ntBASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 AC072052.1-201ENST00000496556 306 ntBASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 MIR4489-201ENST00000578869 62 ntBASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 MIR1269B-201ENST00000580405 75 ntBASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 AC007620.3-201ENST00000608131 497 ntBASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 MIR6862-1-201ENST00000613016 70 ntBASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 MIR6862-2-201ENST00000614755 70 ntBASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 AC244517.3-201ENST00000616254 1235 ntBASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 AC012414.7-202ENST00000622705 1090 ntBASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 Z95327.2-201ENST00000414579 1873 ntBASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.49□□□□□ -1.69
CCNB1IP1Q9NPC3 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 AP001002.1-201ENST00000625148 1513 ntBASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 PANDAR-201ENST00000629595 1506 ntBASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 AC104651.2-201ENST00000447549 528 ntBASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 AC069277.2-201ENST00000454211 432 ntBASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 AL389915.2-201ENST00000454576 441 ntBASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 AC079841.1-201ENST00000481228 950 ntBASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 AC005000.1-201ENST00000536192 288 ntBASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 AC006453.5-201ENST00000636451 619 ntBASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 ASNSP1-201ENST00000518311 1939 ntBASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CCNB1IP1Q9NPC3 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCNB1IP1Q9NPC3 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCNB1IP1Q9NPC3 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.47□□□□□ -1.69
CCNB1IP1Q9NPC3 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.47□□□□□ -1.69
CCNB1IP1Q9NPC3 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCNB1IP1Q9NPC3 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CCNB1IP1Q9NPC3 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCNB1IP1Q9NPC3 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CCNB1IP1Q9NPC3 U3.2-201ENST00000362981 210 ntBASIC4.47□□□□□ -1.69
CCNB1IP1Q9NPC3 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
CCNB1IP1Q9NPC3 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.47□□□□□ -1.69
CCNB1IP1Q9NPC3 RN7SKP114-201ENST00000410327 279 ntBASIC4.47□□□□□ -1.69
CCNB1IP1Q9NPC3 RNU2-50P-201ENST00000410494 143 ntBASIC4.47□□□□□ -1.69
CCNB1IP1Q9NPC3 OR2X1P-201ENST00000421144 687 ntBASIC4.47□□□□□ -1.69
CCNB1IP1Q9NPC3 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms