Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.91□□□□□ -1.62
LRRC40Q9H9A6 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.91□□□□□ -1.62
LRRC40Q9H9A6 RNA5SP392-201ENST00000516905 112 ntBASIC4.91□□□□□ -1.62
LRRC40Q9H9A6 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.91□□□□□ -1.62
LRRC40Q9H9A6 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.91□□□□□ -1.62
LRRC40Q9H9A6 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.91□□□□□ -1.62
LRRC40Q9H9A6 NPM1P35-201ENST00000533043 868 ntBASIC4.91□□□□□ -1.62
LRRC40Q9H9A6 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.91□□□□□ -1.62
LRRC40Q9H9A6 AL049874.4-201ENST00000557593 255 ntBASIC4.91□□□□□ -1.62
LRRC40Q9H9A6 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.91□□□□□ -1.62
LRRC40Q9H9A6 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.91□□□□□ -1.62
LRRC40Q9H9A6 ADAM3B-201ENST00000569937 840 ntBASIC4.91□□□□□ -1.62
LRRC40Q9H9A6 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.91□□□□□ -1.62
LRRC40Q9H9A6 AC027281.1-201ENST00000574178 758 ntBASIC4.91□□□□□ -1.62
LRRC40Q9H9A6 NPM1P45-201ENST00000583151 559 ntBASIC4.91□□□□□ -1.62
LRRC40Q9H9A6 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.91□□□□□ -1.62
LRRC40Q9H9A6 RNF138P2-201ENST00000603490 592 ntBASIC4.91□□□□□ -1.62
LRRC40Q9H9A6 AL121932.1-201ENST00000605542 214 ntBASIC4.91□□□□□ -1.62
LRRC40Q9H9A6 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.91□□□□□ -1.62
LRRC40Q9H9A6 AL022401.1-201ENST00000619498 108 ntBASIC4.91□□□□□ -1.62
LRRC40Q9H9A6 AP002799.1-201ENST00000623552 423 ntBASIC4.91□□□□□ -1.62
LRRC40Q9H9A6 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.91□□□□□ -1.62
LRRC40Q9H9A6 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
LRRC40Q9H9A6 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.91□□□□□ -1.62
LRRC40Q9H9A6 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.91□□□□□ -1.62
LRRC40Q9H9A6 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LRRC40Q9H9A6 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LRRC40Q9H9A6 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LRRC40Q9H9A6 CIR1P2-201ENST00000514821 1342 ntBASIC4.91□□□□□ -1.62
LRRC40Q9H9A6 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LRRC40Q9H9A6 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
LRRC40Q9H9A6 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
LRRC40Q9H9A6 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.9□□□□□ -1.62
LRRC40Q9H9A6 SYT14P1-202ENST00000600441 1448 ntBASIC4.9□□□□□ -1.62
LRRC40Q9H9A6 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
LRRC40Q9H9A6 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
LRRC40Q9H9A6 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.9□□□□□ -1.62
LRRC40Q9H9A6 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
LRRC40Q9H9A6 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.9□□□□□ -1.63
LRRC40Q9H9A6 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
LRRC40Q9H9A6 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
LRRC40Q9H9A6 RNU6-386P-201ENST00000362650 107 ntBASIC4.9□□□□□ -1.63
LRRC40Q9H9A6 RN7SKP247-201ENST00000411094 308 ntBASIC4.9□□□□□ -1.63
LRRC40Q9H9A6 E2F6P2-201ENST00000420708 748 ntBASIC4.9□□□□□ -1.63
LRRC40Q9H9A6 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LRRC40Q9H9A6 RPS17P8-201ENST00000434525 335 ntBASIC4.9□□□□□ -1.63
LRRC40Q9H9A6 AC004938.1-201ENST00000438468 308 ntBASIC4.9□□□□□ -1.63
LRRC40Q9H9A6 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.9□□□□□ -1.63
LRRC40Q9H9A6 CALM1P2-201ENST00000452941 448 ntBASIC4.9□□□□□ -1.63
LRRC40Q9H9A6 RPL23AP56-201ENST00000460778 453 ntBASIC4.9□□□□□ -1.63
LRRC40Q9H9A6 RPSAP50-201ENST00000481955 852 ntBASIC4.9□□□□□ -1.63
LRRC40Q9H9A6 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.9□□□□□ -1.63
LRRC40Q9H9A6 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.9□□□□□ -1.63
LRRC40Q9H9A6 AC093763.2-201ENST00000505334 1223 ntBASIC4.9□□□□□ -1.63
LRRC40Q9H9A6 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.9□□□□□ -1.63
LRRC40Q9H9A6 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.9□□□□□ -1.63
LRRC40Q9H9A6 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
LRRC40Q9H9A6 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.9□□□□□ -1.63
LRRC40Q9H9A6 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.9□□□□□ -1.63
LRRC40Q9H9A6 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
LRRC40Q9H9A6 AC087477.6-201ENST00000559595 843 ntBASIC4.9□□□□□ -1.63
LRRC40Q9H9A6 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.9□□□□□ -1.63
LRRC40Q9H9A6 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.9□□□□□ -1.63
LRRC40Q9H9A6 AL512624.1-201ENST00000613638 469 ntBASIC4.9□□□□□ -1.63
LRRC40Q9H9A6 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
LRRC40Q9H9A6 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
LRRC40Q9H9A6 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
LRRC40Q9H9A6 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.9□□□□□ -1.63
LRRC40Q9H9A6 SALL4P2-201ENST00000423288 2910 ntBASIC4.9□□□□□ -1.63
LRRC40Q9H9A6 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LRRC40Q9H9A6 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LRRC40Q9H9A6 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LRRC40Q9H9A6 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
LRRC40Q9H9A6 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.89□□□□□ -1.63
LRRC40Q9H9A6 RN7SKP95-201ENST00000362860 303 ntBASIC4.89□□□□□ -1.63
LRRC40Q9H9A6 RNU6-1251P-201ENST00000364502 107 ntBASIC4.89□□□□□ -1.63
LRRC40Q9H9A6 RN7SKP269-201ENST00000365545 319 ntBASIC4.89□□□□□ -1.63
LRRC40Q9H9A6 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.89□□□□□ -1.63
LRRC40Q9H9A6 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
LRRC40Q9H9A6 AC093719.1-202ENST00000392735 373 ntBASIC4.89□□□□□ -1.63
LRRC40Q9H9A6 AL034374.1-201ENST00000406329 351 ntBASIC4.89□□□□□ -1.63
LRRC40Q9H9A6 FABP7P2-201ENST00000429946 379 ntBASIC4.89□□□□□ -1.63
LRRC40Q9H9A6 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
LRRC40Q9H9A6 AL392003.1-201ENST00000434394 243 ntBASIC4.89□□□□□ -1.63
LRRC40Q9H9A6 PRPF38AP2-201ENST00000438179 851 ntBASIC4.89□□□□□ -1.63
LRRC40Q9H9A6 MTND6P18-201ENST00000439477 513 ntBASIC4.89□□□□□ -1.63
LRRC40Q9H9A6 RPL31P20-201ENST00000449593 360 ntBASIC4.89□□□□□ -1.63
LRRC40Q9H9A6 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.89□□□□□ -1.63
LRRC40Q9H9A6 RN7SL629P-201ENST00000489622 285 ntBASIC4.89□□□□□ -1.63
LRRC40Q9H9A6 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.89□□□□□ -1.63
LRRC40Q9H9A6 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.89□□□□□ -1.63
LRRC40Q9H9A6 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.89□□□□□ -1.63
LRRC40Q9H9A6 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.89□□□□□ -1.63
LRRC40Q9H9A6 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.89□□□□□ -1.63
LRRC40Q9H9A6 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.89□□□□□ -1.63
LRRC40Q9H9A6 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.89□□□□□ -1.63
LRRC40Q9H9A6 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
LRRC40Q9H9A6 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
LRRC40Q9H9A6 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.89□□□□□ -1.63
LRRC40Q9H9A6 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms