Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
CCSER1Q9C0I3 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 RPS26P2-201ENST00000440331 348 ntBASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 RAB28P3-201ENST00000448325 597 ntBASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 AL591363.1-201ENST00000450091 483 ntBASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 TPT1P1-201ENST00000458495 518 ntBASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 AC092324.1-201ENST00000468671 324 ntBASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 OR9N1P-201ENST00000491296 333 ntBASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 AC018442.3-201ENST00000523025 183 ntBASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 MIR4675-201ENST00000577898 77 ntBASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 MIR4737-201ENST00000583979 81 ntBASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 Mico1.1-201ENST00000611698 204 ntBASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 AP001784.1-201ENST00000624107 428 ntBASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CCSER1Q9C0I3 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 AL031119.1-201ENST00000404707 1879 ntBASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 MIR365B-201ENST00000362317 111 ntBASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 RNA5SP105-201ENST00000391123 113 ntBASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 RNA5SP113-201ENST00000410486 84 ntBASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 RSU1P3-201ENST00000412878 835 ntBASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 AC104837.2-201ENST00000427236 424 ntBASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 OR2B7P-201ENST00000429302 934 ntBASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 NRBF2P3-201ENST00000432731 865 ntBASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 FCF1P7-201ENST00000451185 558 ntBASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 AC108751.2-201ENST00000469993 231 ntBASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 RN7SKP46-201ENST00000515942 234 ntBASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 RNU6-319P-201ENST00000516025 108 ntBASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 AC079075.1-201ENST00000559543 878 ntBASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 AC116651.1-201ENST00000609724 556 ntBASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 AC093775.1-201ENST00000624154 1868 ntBASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 AL442639.1-201ENST00000625030 1899 ntBASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CCSER1Q9C0I3 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCSER1Q9C0I3 AC073429.2-201ENST00000569694 1444 ntBASIC5.31□□□□□ -1.56
CCSER1Q9C0I3 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.31□□□□□ -1.56
CCSER1Q9C0I3 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.31□□□□□ -1.56
CCSER1Q9C0I3 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.31□□□□□ -1.56
CCSER1Q9C0I3 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CCSER1Q9C0I3 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CCSER1Q9C0I3 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.31□□□□□ -1.56
CCSER1Q9C0I3 AC103591.2-201ENST00000265259 766 ntBASIC5.31□□□□□ -1.56
CCSER1Q9C0I3 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCSER1Q9C0I3 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCSER1Q9C0I3 RNU1-82P-201ENST00000390851 165 ntBASIC5.31□□□□□ -1.56
CCSER1Q9C0I3 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.31□□□□□ -1.56
CCSER1Q9C0I3 OR6C64P-201ENST00000419708 825 ntBASIC5.31□□□□□ -1.56
CCSER1Q9C0I3 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCSER1Q9C0I3 AC079168.2-201ENST00000453977 416 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms