Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 NCLP2-201ENST00000416078 1462 ntBASIC4.99□□□□□ -1.61
RPRD1AQ96P16 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
RPRD1AQ96P16 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.98□□□□□ -1.61
RPRD1AQ96P16 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.98□□□□□ -1.61
RPRD1AQ96P16 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.98□□□□□ -1.61
RPRD1AQ96P16 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
RPRD1AQ96P16 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RPRD1AQ96P16 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RPRD1AQ96P16 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
RPRD1AQ96P16 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RPRD1AQ96P16 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RPRD1AQ96P16 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
RPRD1AQ96P16 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RPRD1AQ96P16 Y_RNA.62-201ENST00000362840 99 ntBASIC4.98□□□□□ -1.61
RPRD1AQ96P16 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RPRD1AQ96P16 U3.30-201ENST00000391308 210 ntBASIC4.98□□□□□ -1.61
RPRD1AQ96P16 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.98□□□□□ -1.61
RPRD1AQ96P16 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.98□□□□□ -1.61
RPRD1AQ96P16 AC013470.3-201ENST00000420252 1194 ntBASIC4.98□□□□□ -1.61
RPRD1AQ96P16 AC004074.1-201ENST00000421810 1063 ntBASIC4.98□□□□□ -1.61
RPRD1AQ96P16 OR2B7P-201ENST00000429302 934 ntBASIC4.98□□□□□ -1.61
RPRD1AQ96P16 RPS17P8-201ENST00000434525 335 ntBASIC4.98□□□□□ -1.61
RPRD1AQ96P16 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.98□□□□□ -1.61
RPRD1AQ96P16 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.98□□□□□ -1.61
RPRD1AQ96P16 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.98□□□□□ -1.61
RPRD1AQ96P16 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC4.98□□□□□ -1.61
RPRD1AQ96P16 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.98□□□□□ -1.61
RPRD1AQ96P16 MTND4LP12-201ENST00000448237 295 ntBASIC4.98□□□□□ -1.61
RPRD1AQ96P16 OR6C72P-201ENST00000451403 892 ntBASIC4.98□□□□□ -1.61
RPRD1AQ96P16 GYG1P1-201ENST00000460864 698 ntBASIC4.98□□□□□ -1.61
RPRD1AQ96P16 RN7SL558P-201ENST00000497468 299 ntBASIC4.98□□□□□ -1.61
RPRD1AQ96P16 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.98□□□□□ -1.61
RPRD1AQ96P16 RNU6-709P-201ENST00000517257 104 ntBASIC4.98□□□□□ -1.61
RPRD1AQ96P16 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.98□□□□□ -1.61
RPRD1AQ96P16 HNRNPRP2-201ENST00000528421 743 ntBASIC4.98□□□□□ -1.61
RPRD1AQ96P16 AC005868.1-201ENST00000536421 331 ntBASIC4.98□□□□□ -1.61
RPRD1AQ96P16 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.98□□□□□ -1.61
RPRD1AQ96P16 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.98□□□□□ -1.61
RPRD1AQ96P16 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.98□□□□□ -1.61
RPRD1AQ96P16 AC133555.2-201ENST00000550213 292 ntBASIC4.98□□□□□ -1.61
RPRD1AQ96P16 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.98□□□□□ -1.61
RPRD1AQ96P16 AL049830.4-201ENST00000555149 351 ntBASIC4.98□□□□□ -1.61
RPRD1AQ96P16 SNORD39.2-201ENST00000579995 76 ntBASIC4.98□□□□□ -1.61
RPRD1AQ96P16 AC022726.1-201ENST00000587475 207 ntBASIC4.98□□□□□ -1.61
RPRD1AQ96P16 AC096553.1-201ENST00000605169 829 ntBASIC4.98□□□□□ -1.61
RPRD1AQ96P16 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.98□□□□□ -1.61
RPRD1AQ96P16 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RPRD1AQ96P16 NF1P10-201ENST00000613227 742 ntBASIC4.98□□□□□ -1.61
RPRD1AQ96P16 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.98□□□□□ -1.61
RPRD1AQ96P16 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RPRD1AQ96P16 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.98□□□□□ -1.61
RPRD1AQ96P16 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.98□□□□□ -1.61
RPRD1AQ96P16 AC100778.3-201ENST00000580060 1750 ntBASIC4.98□□□□□ -1.61
RPRD1AQ96P16 OR14L1P-202ENST00000641545 3009 ntBASIC4.98□□□□□ -1.61
RPRD1AQ96P16 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RPRD1AQ96P16 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
RPRD1AQ96P16 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
RPRD1AQ96P16 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.97□□□□□ -1.61
RPRD1AQ96P16 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC4.97□□□□□ -1.61
RPRD1AQ96P16 VPS35P1-201ENST00000563400 1518 ntBASIC4.97□□□□□ -1.61
RPRD1AQ96P16 AC053481.2-202ENST00000582394 1500 ntBASIC4.97□□□□□ -1.61
RPRD1AQ96P16 AL731566.1-201ENST00000620490 1937 ntBASIC4.97□□□□□ -1.61
RPRD1AQ96P16 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.97□□□□□ -1.61
RPRD1AQ96P16 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
RPRD1AQ96P16 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.97□□□□□ -1.61
RPRD1AQ96P16 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RPRD1AQ96P16 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RPRD1AQ96P16 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.97□□□□□ -1.61
RPRD1AQ96P16 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.97□□□□□ -1.61
RPRD1AQ96P16 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
RPRD1AQ96P16 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.97□□□□□ -1.61
RPRD1AQ96P16 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.97□□□□□ -1.61
RPRD1AQ96P16 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.97□□□□□ -1.61
RPRD1AQ96P16 RNA5SP87-201ENST00000384155 118 ntBASIC4.97□□□□□ -1.61
RPRD1AQ96P16 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RPRD1AQ96P16 RPL10P10-201ENST00000403509 664 ntBASIC4.97□□□□□ -1.61
RPRD1AQ96P16 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.97□□□□□ -1.61
RPRD1AQ96P16 Z80107.2-201ENST00000445127 392 ntBASIC4.97□□□□□ -1.61
RPRD1AQ96P16 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RPRD1AQ96P16 RNA5SP103-201ENST00000459503 118 ntBASIC4.97□□□□□ -1.61
RPRD1AQ96P16 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RPRD1AQ96P16 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.97□□□□□ -1.61
RPRD1AQ96P16 BUD31P1-201ENST00000521828 359 ntBASIC4.97□□□□□ -1.61
RPRD1AQ96P16 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.97□□□□□ -1.61
RPRD1AQ96P16 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.97□□□□□ -1.61
RPRD1AQ96P16 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.97□□□□□ -1.61
RPRD1AQ96P16 AC091042.1-201ENST00000579213 173 ntBASIC4.97□□□□□ -1.61
RPRD1AQ96P16 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.97□□□□□ -1.61
RPRD1AQ96P16 AL391358.1-201ENST00000605342 190 ntBASIC4.97□□□□□ -1.61
RPRD1AQ96P16 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RPRD1AQ96P16 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.97□□□□□ -1.61
RPRD1AQ96P16 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
RPRD1AQ96P16 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
RPRD1AQ96P16 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
RPRD1AQ96P16 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
RPRD1AQ96P16 A2MP1-204ENST00000566278 4130 ntBASIC4.97□□□□□ -1.61
RPRD1AQ96P16 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RPRD1AQ96P16 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.97□□□□□ -1.61
RPRD1AQ96P16 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RPRD1AQ96P16 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms