Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 HMGB3P24-201ENST00000433260 622 ntBASIC5.43□□□□□ -1.54
VPS50Q96JG6 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS50Q96JG6 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS50Q96JG6 AL359265.1-201ENST00000440296 795 ntBASIC5.43□□□□□ -1.54
VPS50Q96JG6 VN1R25P-201ENST00000443385 738 ntBASIC5.43□□□□□ -1.54
VPS50Q96JG6 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS50Q96JG6 MEMO1P4-201ENST00000453590 386 ntBASIC5.43□□□□□ -1.54
VPS50Q96JG6 OFD1P7Y-201ENST00000454643 1155 ntBASIC5.43□□□□□ -1.54
VPS50Q96JG6 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.43□□□□□ -1.54
VPS50Q96JG6 AC074386.1-201ENST00000476560 767 ntBASIC5.43□□□□□ -1.54
VPS50Q96JG6 AC087672.1-201ENST00000479876 766 ntBASIC5.43□□□□□ -1.54
VPS50Q96JG6 RN7SL570P-201ENST00000484405 292 ntBASIC5.43□□□□□ -1.54
VPS50Q96JG6 RN7SL466P-201ENST00000497546 295 ntBASIC5.43□□□□□ -1.54
VPS50Q96JG6 AC026414.1-201ENST00000504046 698 ntBASIC5.43□□□□□ -1.54
VPS50Q96JG6 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VPS50Q96JG6 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS50Q96JG6 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.43□□□□□ -1.54
VPS50Q96JG6 IGLV3-24-201ENST00000517477 197 ntBASIC5.43□□□□□ -1.54
VPS50Q96JG6 IGHV3-63-201ENST00000518422 341 ntBASIC5.43□□□□□ -1.54
VPS50Q96JG6 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.43□□□□□ -1.54
VPS50Q96JG6 OR8I1P-201ENST00000529291 931 ntBASIC5.43□□□□□ -1.54
VPS50Q96JG6 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC5.43□□□□□ -1.54
VPS50Q96JG6 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS50Q96JG6 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS50Q96JG6 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS50Q96JG6 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.43□□□□□ -1.54
VPS50Q96JG6 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.43□□□□□ -1.54
VPS50Q96JG6 AL390726.5-202ENST00000564800 256 ntBASIC5.43□□□□□ -1.54
VPS50Q96JG6 AC008751.2-201ENST00000597885 980 ntBASIC5.43□□□□□ -1.54
VPS50Q96JG6 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.43□□□□□ -1.54
VPS50Q96JG6 AL589674.2-201ENST00000604304 337 ntBASIC5.43□□□□□ -1.54
VPS50Q96JG6 NANOGP3-201ENST00000605855 286 ntBASIC5.43□□□□□ -1.54
VPS50Q96JG6 AP001005.3-201ENST00000622049 129 ntBASIC5.43□□□□□ -1.54
VPS50Q96JG6 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.43□□□□□ -1.54
VPS50Q96JG6 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.43□□□□□ -1.54
VPS50Q96JG6 AC139713.2-210ENST00000641741 992 ntBASIC5.43□□□□□ -1.54
VPS50Q96JG6 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
VPS50Q96JG6 AC073136.1-201ENST00000449426 2884 ntBASIC5.43□□□□□ -1.54
VPS50Q96JG6 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
VPS50Q96JG6 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.43□□□□□ -1.54
VPS50Q96JG6 SPATA2P1-201ENST00000431223 2055 ntBASIC5.43□□□□□ -1.54
VPS50Q96JG6 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VPS50Q96JG6 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
VPS50Q96JG6 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VPS50Q96JG6 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VPS50Q96JG6 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VPS50Q96JG6 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.42□□□□□ -1.54
VPS50Q96JG6 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VPS50Q96JG6 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
VPS50Q96JG6 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.42□□□□□ -1.54
VPS50Q96JG6 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
VPS50Q96JG6 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
VPS50Q96JG6 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.42□□□□□ -1.54
VPS50Q96JG6 MIR142-201ENST00000384835 87 ntBASIC5.42□□□□□ -1.54
VPS50Q96JG6 GAPDHP42-201ENST00000406848 981 ntBASIC5.42□□□□□ -1.54
VPS50Q96JG6 RNU4-22P-201ENST00000411058 166 ntBASIC5.42□□□□□ -1.54
VPS50Q96JG6 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.42□□□□□ -1.54
VPS50Q96JG6 MRPL53P1-201ENST00000414323 319 ntBASIC5.42□□□□□ -1.54
VPS50Q96JG6 LIPT1P1-201ENST00000415870 1186 ntBASIC5.42□□□□□ -1.54
VPS50Q96JG6 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.42□□□□□ -1.54
VPS50Q96JG6 LINC01347-201ENST00000417964 355 ntBASIC5.42□□□□□ -1.54
VPS50Q96JG6 MTCO3P4-201ENST00000419236 787 ntBASIC5.42□□□□□ -1.54
VPS50Q96JG6 KRR1P1-201ENST00000419430 803 ntBASIC5.42□□□□□ -1.54
VPS50Q96JG6 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
VPS50Q96JG6 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.42□□□□□ -1.54
VPS50Q96JG6 GTF2IP3-201ENST00000433887 494 ntBASIC5.42□□□□□ -1.54
VPS50Q96JG6 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.42□□□□□ -1.54
VPS50Q96JG6 Z73417.1-201ENST00000447373 778 ntBASIC5.42□□□□□ -1.54
VPS50Q96JG6 AL591623.2-201ENST00000449978 222 ntBASIC5.42□□□□□ -1.54
VPS50Q96JG6 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.42□□□□□ -1.54
VPS50Q96JG6 GTF2IP12-201ENST00000456547 356 ntBASIC5.42□□□□□ -1.54
VPS50Q96JG6 AC026348.1-201ENST00000462549 1053 ntBASIC5.42□□□□□ -1.54
VPS50Q96JG6 UBFD1P1-201ENST00000473259 814 ntBASIC5.42□□□□□ -1.54
VPS50Q96JG6 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.42□□□□□ -1.54
VPS50Q96JG6 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.42□□□□□ -1.54
VPS50Q96JG6 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.42□□□□□ -1.54
VPS50Q96JG6 BX510359.5-201ENST00000515651 304 ntBASIC5.42□□□□□ -1.54
VPS50Q96JG6 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.42□□□□□ -1.54
VPS50Q96JG6 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.42□□□□□ -1.54
VPS50Q96JG6 RN7SKP253-201ENST00000516424 309 ntBASIC5.42□□□□□ -1.54
VPS50Q96JG6 RNU6-1028P-201ENST00000517164 93 ntBASIC5.42□□□□□ -1.54
VPS50Q96JG6 SNORA43.3-201ENST00000517240 103 ntBASIC5.42□□□□□ -1.54
VPS50Q96JG6 NRBF2P4-201ENST00000520874 850 ntBASIC5.42□□□□□ -1.54
VPS50Q96JG6 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.42□□□□□ -1.54
VPS50Q96JG6 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.42□□□□□ -1.54
VPS50Q96JG6 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.42□□□□□ -1.54
VPS50Q96JG6 AC087897.1-201ENST00000550134 156 ntBASIC5.42□□□□□ -1.54
VPS50Q96JG6 OR4U1P-201ENST00000554958 912 ntBASIC5.42□□□□□ -1.54
VPS50Q96JG6 RBM22P12-201ENST00000567098 1255 ntBASIC5.42□□□□□ -1.54
VPS50Q96JG6 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.42□□□□□ -1.54
VPS50Q96JG6 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
VPS50Q96JG6 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
VPS50Q96JG6 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.42□□□□□ -1.54
VPS50Q96JG6 AC002487.1-201ENST00000604565 994 ntBASIC5.42□□□□□ -1.54
VPS50Q96JG6 AC005377.1-201ENST00000605126 456 ntBASIC5.42□□□□□ -1.54
VPS50Q96JG6 BX323046.1-201ENST00000610145 535 ntBASIC5.42□□□□□ -1.54
VPS50Q96JG6 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
VPS50Q96JG6 MIR6826-201ENST00000617808 98 ntBASIC5.42□□□□□ -1.54
VPS50Q96JG6 AP005431.1-201ENST00000618479 319 ntBASIC5.42□□□□□ -1.54
VPS50Q96JG6 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms