Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.06□□□□□ -1.6
SLC44A1Q8WWI5 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
SLC44A1Q8WWI5 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 OR4K17-201ENST00000315543 1032 ntBASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 RN7SKP162-201ENST00000363605 345 ntBASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 MIR137-201ENST00000385223 102 ntBASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 BX510359.3-201ENST00000422168 306 ntBASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 CKS1BP6-201ENST00000424932 240 ntBASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 RPS29P9-201ENST00000440360 171 ntBASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 RNF2P1-201ENST00000442955 1010 ntBASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 HMGB1P4-201ENST00000455362 567 ntBASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 FCF1P6-201ENST00000456841 595 ntBASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 AC092691.2-201ENST00000461787 803 ntBASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 NPM1P29-201ENST00000483112 803 ntBASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 AC108693.1-201ENST00000496068 432 ntBASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 AC112198.4-201ENST00000515450 351 ntBASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 AC007204.2-201ENST00000615022 616 ntBASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 AC090527.3-201ENST00000619041 548 ntBASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 AC095038.2-201ENST00000621464 1070 ntBASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 AC090617.9-201ENST00000623751 147 ntBASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 SAMMSON-209ENST00000641222 1100 ntBASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 AC007382.1-201ENST00000624376 2618 ntBASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 RBPJP2-201ENST00000618187 1444 ntBASIC5.05□□□□□ -1.6
SLC44A1Q8WWI5 SPATA2P1-201ENST00000431223 2055 ntBASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 SNORA67-201ENST00000384423 137 ntBASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 GAPDHP15-201ENST00000398586 975 ntBASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 SNORA77-201ENST00000408716 125 ntBASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 RN7SKP59-201ENST00000410520 314 ntBASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 ELOCP6-201ENST00000429066 328 ntBASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 AC092447.2-201ENST00000435487 669 ntBASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 RHEBP2-201ENST00000450289 600 ntBASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 ELOCP12-201ENST00000458706 328 ntBASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 RN7SL799P-201ENST00000475891 298 ntBASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 SUMO1P1-201ENST00000497904 306 ntBASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 UBTFL9-201ENST00000534504 1148 ntBASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 AL359513.1-201ENST00000614364 557 ntBASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 AC018926.1-201ENST00000616335 435 ntBASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 AC074140.1-201ENST00000621617 208 ntBASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 AC068880.4-201ENST00000623082 495 ntBASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 AC092159.4-201ENST00000624944 550 ntBASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SLC44A1Q8WWI5 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms