Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC099654.3-201ENST00000447087 1546 ntBASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
ALMS1Q8TCU4 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 MIR554-201ENST00000384874 96 ntBASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 NFYAP1-201ENST00000431953 972 ntBASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 AC025164.1-201ENST00000496249 478 ntBASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 CASC19-284ENST00000642142 1868 ntBASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 RNA5SP283-201ENST00000365604 119 ntBASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 SDHCP2-201ENST00000398565 501 ntBASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 AC114814.2-201ENST00000419195 485 ntBASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 AC233968.1-201ENST00000611212 1300 ntBASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 AC138761.5-201ENST00000433967 325 ntBASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 AC010460.1-201ENST00000507087 466 ntBASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 AC119751.5-201ENST00000514077 770 ntBASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 RNU1-103P-201ENST00000516502 125 ntBASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 AC027369.5-201ENST00000533838 755 ntBASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 RNU4-89P-201ENST00000607443 133 ntBASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 AL358178.1-201ENST00000407698 397 ntBASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 COX6CP15-201ENST00000426313 211 ntBASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 AL035246.1-201ENST00000433554 1255 ntBASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 AC022133.1-201ENST00000490961 571 ntBASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 AL354984.3-201ENST00000604803 325 ntBASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 FRG1EP-201ENST00000634469 770 ntBASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ALMS1Q8TCU4 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 MIR383-201ENST00000362257 73 ntBASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 AC011998.1-201ENST00000433403 117 ntBASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 RN7SL517P-201ENST00000462240 305 ntBASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 RNA5SP230-201ENST00000517039 122 ntBASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 AL391684.1-202ENST00000641293 1636 ntBASIC3.1□□□□□ -1.91
ALMS1Q8TCU4 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms