Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 AC007255.2-201ENST00000604053 631 ntBASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 AC012368.3-201ENST00000604190 219 ntBASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 AL683826.1-201ENST00000624104 627 ntBASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 CACHD1-201ENST00000290039 5275 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NPAS3Q8IXF0 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 TTTY10-202ENST00000455084 1628 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 C18orf54-206ENST00000620105 5693 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 Y_RNA.197-201ENST00000364004 102 ntBASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 RNA5SP232-201ENST00000364144 119 ntBASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 RNU6-33P-201ENST00000384793 107 ntBASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 VIM2P-201ENST00000402383 1294 ntBASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 RPL12P23-201ENST00000405880 490 ntBASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 NACAP7-201ENST00000407371 609 ntBASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 MIR1275-201ENST00000408770 80 ntBASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 RNU6-373P-201ENST00000411247 98 ntBASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 AC096644.3-201ENST00000416788 338 ntBASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 PLA2G12AP2-201ENST00000424744 264 ntBASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 KRTAP3-4P-201ENST00000430780 280 ntBASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 AL160004.2-201ENST00000432935 350 ntBASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 GAPDHP20-201ENST00000444107 1007 ntBASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 AC118758.1-202ENST00000454719 225 ntBASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 AC104339.1-201ENST00000465478 348 ntBASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 RPS3AP50-201ENST00000487064 803 ntBASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 SSX8-201ENST00000506270 579 ntBASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 RNU6-1143P-201ENST00000516125 104 ntBASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 NPM1P52-201ENST00000518264 846 ntBASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 AC022634.1-201ENST00000520765 532 ntBASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 AC007068.2-201ENST00000543168 395 ntBASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 AC009729.1-201ENST00000548873 1133 ntBASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 AC090826.1-203ENST00000569235 490 ntBASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 MIR4742-201ENST00000581069 85 ntBASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 AC016727.2-201ENST00000603988 621 ntBASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 AC004241.2-201ENST00000614562 444 ntBASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 AC244517.12-201ENST00000623581 663 ntBASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 AC004014.2-201ENST00000623718 5122 ntBASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 AC012618.3-205ENST00000637896 1496 ntBASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 UGT2B24P-201ENST00000514441 1597 ntBASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
NPAS3Q8IXF0 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
NPAS3Q8IXF0 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms