Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CROCCP3Q8IVE0 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.57□□□□□ -1.68
CROCCP3Q8IVE0 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CROCCP3Q8IVE0 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CROCCP3Q8IVE0 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CROCCP3Q8IVE0 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CROCCP3Q8IVE0 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.57□□□□□ -1.68
CROCCP3Q8IVE0 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.57□□□□□ -1.68
CROCCP3Q8IVE0 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CROCCP3Q8IVE0 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CROCCP3Q8IVE0 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 RNA5SP52-201ENST00000362448 134 ntBASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 RNA5SP433-201ENST00000364491 114 ntBASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 RHOT1P2-201ENST00000366423 333 ntBASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 HMGB1P10-201ENST00000395823 563 ntBASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 RN7SKP216-201ENST00000411050 312 ntBASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 SLC20A1P1-201ENST00000413906 956 ntBASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 LINC01347-201ENST00000417964 355 ntBASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 GAPDHP49-201ENST00000421421 961 ntBASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 AC092646.1-201ENST00000427142 901 ntBASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 AL512661.1-201ENST00000434586 1253 ntBASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 RPL34P26-201ENST00000445636 354 ntBASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 GAPDHP25-201ENST00000447061 1001 ntBASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 VDAC2P4-201ENST00000452925 711 ntBASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 AL035090.1-201ENST00000454835 332 ntBASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 AC010627.1-201ENST00000503819 1294 ntBASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 AC026368.1-201ENST00000614934 690 ntBASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 AC008691.1-209ENST00000642094 814 ntBASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.56□□□□□ -1.68
CROCCP3Q8IVE0 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 RNA5SP513-201ENST00000364648 118 ntBASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 SNORA70-201ENST00000384436 135 ntBASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 OR8V1P-201ENST00000395193 873 ntBASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 RBBP4P5-201ENST00000398583 1266 ntBASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 RNU4-27P-201ENST00000410889 139 ntBASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 AL158050.1-201ENST00000416077 457 ntBASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 RAC1P3-201ENST00000416129 580 ntBASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 UBE2D3P3-201ENST00000426992 425 ntBASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 UBE2V1P6-201ENST00000430840 422 ntBASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 AL035458.1-201ENST00000433096 585 ntBASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 AL022324.2-201ENST00000434827 780 ntBASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 PNKDP1-201ENST00000435914 430 ntBASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 LINC00328-2P-201ENST00000436585 219 ntBASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 UBQLN1P1-207ENST00000441056 1169 ntBASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 MTCYBP21-201ENST00000443300 1113 ntBASIC4.55□□□□□ -1.68
CROCCP3Q8IVE0 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 195.4 ms