Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
SCXQ7RTU7 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.3□□□□□ -1.88
SCXQ7RTU7 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC3.3□□□□□ -1.88
SCXQ7RTU7 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SCXQ7RTU7 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SCXQ7RTU7 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SCXQ7RTU7 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SCXQ7RTU7 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC3.3□□□□□ -1.88
SCXQ7RTU7 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SCXQ7RTU7 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SCXQ7RTU7 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SCXQ7RTU7 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.3□□□□□ -1.88
SCXQ7RTU7 RN7SKP104-201ENST00000362605 328 ntBASIC3.3□□□□□ -1.88
SCXQ7RTU7 RNA5SP455-201ENST00000365190 119 ntBASIC3.3□□□□□ -1.88
SCXQ7RTU7 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SCXQ7RTU7 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SCXQ7RTU7 AL035419.1-201ENST00000397037 564 ntBASIC3.3□□□□□ -1.88
SCXQ7RTU7 NUDT19P3-201ENST00000404698 555 ntBASIC3.3□□□□□ -1.88
SCXQ7RTU7 Y_RNA.625-201ENST00000411256 107 ntBASIC3.3□□□□□ -1.88
SCXQ7RTU7 RPL36AP10-201ENST00000421785 322 ntBASIC3.3□□□□□ -1.88
SCXQ7RTU7 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
SCXQ7RTU7 RCC2P2-201ENST00000422174 918 ntBASIC3.3□□□□□ -1.88
SCXQ7RTU7 EI24P4-201ENST00000423683 1078 ntBASIC3.3□□□□□ -1.88
SCXQ7RTU7 IPMKP1-201ENST00000425988 855 ntBASIC3.3□□□□□ -1.88
SCXQ7RTU7 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC3.3□□□□□ -1.88
SCXQ7RTU7 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC3.3□□□□□ -1.88
SCXQ7RTU7 AC090018.1-201ENST00000434369 367 ntBASIC3.3□□□□□ -1.88
SCXQ7RTU7 UBE2V2P1-201ENST00000434717 398 ntBASIC3.3□□□□□ -1.88
SCXQ7RTU7 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC3.3□□□□□ -1.88
SCXQ7RTU7 AC093716.1-201ENST00000435923 377 ntBASIC3.3□□□□□ -1.88
SCXQ7RTU7 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC3.3□□□□□ -1.88
SCXQ7RTU7 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC3.3□□□□□ -1.88
SCXQ7RTU7 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC3.3□□□□□ -1.88
SCXQ7RTU7 CACYBPP1-201ENST00000438592 684 ntBASIC3.3□□□□□ -1.88
SCXQ7RTU7 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC3.3□□□□□ -1.88
SCXQ7RTU7 NDUFA5P8-201ENST00000449019 346 ntBASIC3.3□□□□□ -1.88
SCXQ7RTU7 RPS3AP53-201ENST00000454716 778 ntBASIC3.3□□□□□ -1.88
SCXQ7RTU7 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.3□□□□□ -1.88
SCXQ7RTU7 AC097484.1-201ENST00000471148 389 ntBASIC3.3□□□□□ -1.88
SCXQ7RTU7 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC3.3□□□□□ -1.88
SCXQ7RTU7 AL133372.1-201ENST00000493565 745 ntBASIC3.3□□□□□ -1.88
SCXQ7RTU7 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.3□□□□□ -1.88
SCXQ7RTU7 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
SCXQ7RTU7 AC091912.1-201ENST00000511351 248 ntBASIC3.3□□□□□ -1.88
SCXQ7RTU7 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3.3□□□□□ -1.88
SCXQ7RTU7 NDUFB4P12-201ENST00000513465 390 ntBASIC3.3□□□□□ -1.88
SCXQ7RTU7 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC3.3□□□□□ -1.88
SCXQ7RTU7 SCARNA20.4-201ENST00000516969 131 ntBASIC3.3□□□□□ -1.88
SCXQ7RTU7 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.3□□□□□ -1.88
SCXQ7RTU7 AC090819.1-201ENST00000523800 1111 ntBASIC3.3□□□□□ -1.88
SCXQ7RTU7 OR5AZ1P-201ENST00000527448 943 ntBASIC3.3□□□□□ -1.88
SCXQ7RTU7 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC3.3□□□□□ -1.88
SCXQ7RTU7 EDDM3DP-201ENST00000554692 434 ntBASIC3.3□□□□□ -1.88
SCXQ7RTU7 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC3.3□□□□□ -1.88
SCXQ7RTU7 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC3.3□□□□□ -1.88
SCXQ7RTU7 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC3.3□□□□□ -1.88
SCXQ7RTU7 AC040958.1-201ENST00000561102 201 ntBASIC3.3□□□□□ -1.88
SCXQ7RTU7 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC3.3□□□□□ -1.88
SCXQ7RTU7 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC3.3□□□□□ -1.88
SCXQ7RTU7 RN7SL435P-201ENST00000584418 282 ntBASIC3.3□□□□□ -1.88
SCXQ7RTU7 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC3.3□□□□□ -1.88
SCXQ7RTU7 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC3.3□□□□□ -1.88
SCXQ7RTU7 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC3.3□□□□□ -1.88
SCXQ7RTU7 AC005084.1-201ENST00000605160 304 ntBASIC3.3□□□□□ -1.88
SCXQ7RTU7 AC007620.3-201ENST00000608131 497 ntBASIC3.3□□□□□ -1.88
SCXQ7RTU7 AP003400.3-201ENST00000624904 346 ntBASIC3.3□□□□□ -1.88
SCXQ7RTU7 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
SCXQ7RTU7 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SCXQ7RTU7 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
SCXQ7RTU7 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC3.3□□□□□ -1.88
SCXQ7RTU7 CASC19-284ENST00000642142 1868 ntBASIC3.3□□□□□ -1.88
SCXQ7RTU7 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
SCXQ7RTU7 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SCXQ7RTU7 INTS6P1-201ENST00000504674 2530 ntBASIC3.3□□□□□ -1.88
SCXQ7RTU7 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
SCXQ7RTU7 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC3.3□□□□□ -1.88
SCXQ7RTU7 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.3□□□□□ -1.88
SCXQ7RTU7 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
SCXQ7RTU7 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC3.29□□□□□ -1.88
SCXQ7RTU7 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SCXQ7RTU7 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SCXQ7RTU7 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SCXQ7RTU7 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
SCXQ7RTU7 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
SCXQ7RTU7 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SCXQ7RTU7 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.29□□□□□ -1.88
SCXQ7RTU7 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SCXQ7RTU7 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SCXQ7RTU7 EEF1A1P36-201ENST00000427807 1351 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
SCXQ7RTU7 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
SCXQ7RTU7 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
SCXQ7RTU7 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.29□□□□□ -1.88
SCXQ7RTU7 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SCXQ7RTU7 AC100757.1-201ENST00000616872 1835 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 AC006206.1-201ENST00000544842 3387 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 OR10J6P-201ENST00000289731 930 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 AC010132.2-201ENST00000295493 1043 ntBASIC3.29□□□□□ -1.88
SCXQ7RTU7 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SCXQ7RTU7 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms