Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 U8.4-201ENST00000363626 134 ntBASIC6.2□□□□□ -1.42
CCDC62Q6P9F0 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC62Q6P9F0 SNORD116-8-201ENST00000384365 95 ntBASIC6.2□□□□□ -1.42
CCDC62Q6P9F0 MT-TP-201ENST00000387461 68 ntBASIC6.2□□□□□ -1.42
CCDC62Q6P9F0 Y_RNA.578-201ENST00000390903 88 ntBASIC6.2□□□□□ -1.42
CCDC62Q6P9F0 HNRNPDP2-201ENST00000406475 478 ntBASIC6.2□□□□□ -1.42
CCDC62Q6P9F0 HMGB3P31-201ENST00000413333 595 ntBASIC6.2□□□□□ -1.42
CCDC62Q6P9F0 SRSF1P1-201ENST00000424058 520 ntBASIC6.2□□□□□ -1.42
CCDC62Q6P9F0 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC6.2□□□□□ -1.42
CCDC62Q6P9F0 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC62Q6P9F0 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC62Q6P9F0 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC62Q6P9F0 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC62Q6P9F0 ZNF321P-202ENST00000550843 495 ntBASIC6.2□□□□□ -1.42
CCDC62Q6P9F0 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
CCDC62Q6P9F0 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC62Q6P9F0 AC092106.3-201ENST00000611308 722 ntBASIC6.2□□□□□ -1.42
CCDC62Q6P9F0 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC6.2□□□□□ -1.42
CCDC62Q6P9F0 AC109583.2-201ENST00000617367 129 ntBASIC6.2□□□□□ -1.42
CCDC62Q6P9F0 AC241377.1-201ENST00000619797 406 ntBASIC6.2□□□□□ -1.42
CCDC62Q6P9F0 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC6.2□□□□□ -1.42
CCDC62Q6P9F0 AC232271.1-201ENST00000602455 2715 ntBASIC6.2□□□□□ -1.42
CCDC62Q6P9F0 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC62Q6P9F0 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
CCDC62Q6P9F0 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CCDC62Q6P9F0 BCORP1-203ENST00000513194 5093 ntBASIC6.2□□□□□ -1.42
CCDC62Q6P9F0 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC62Q6P9F0 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC62Q6P9F0 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC62Q6P9F0 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CCDC62Q6P9F0 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 RNU4-92P-201ENST00000363783 136 ntBASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 MCTS2P-201ENST00000394552 546 ntBASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 MTCO1P56-201ENST00000401674 224 ntBASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 AL133388.1-201ENST00000404509 287 ntBASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 RPS7P9-201ENST00000414704 586 ntBASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 AC108075.1-201ENST00000424692 529 ntBASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 AC097499.1-201ENST00000444277 208 ntBASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 AC244505.3-201ENST00000454598 187 ntBASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 HSPE1P22-201ENST00000456856 327 ntBASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 RPL7P32-201ENST00000457119 744 ntBASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 AC011037.1-201ENST00000483964 558 ntBASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 AC004453.1-201ENST00000487895 408 ntBASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 RN7SL808P-201ENST00000496066 299 ntBASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 PMS2P3-207ENST00000529061 717 ntBASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 NPM1P42-201ENST00000560329 862 ntBASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 ZNF92P3-201ENST00000596594 954 ntBASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 AC110760.3-201ENST00000598794 467 ntBASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 AL139344.1-201ENST00000605228 195 ntBASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 AC004948.1-201ENST00000609858 672 ntBASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 AC126915.2-201ENST00000610957 190 ntBASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 AP004607.9-201ENST00000618202 316 ntBASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 AL512506.2-201ENST00000624472 458 ntBASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 AC024023.1-201ENST00000624530 922 ntBASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 AC053481.2-202ENST00000582394 1500 ntBASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.19□□□□□ -1.42
CCDC62Q6P9F0 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCDC62Q6P9F0 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC62Q6P9F0 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.18□□□□□ -1.42
CCDC62Q6P9F0 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.18□□□□□ -1.42
CCDC62Q6P9F0 RNA5SP507-201ENST00000363603 121 ntBASIC6.18□□□□□ -1.42
CCDC62Q6P9F0 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC62Q6P9F0 RNU6-224P-201ENST00000384055 107 ntBASIC6.18□□□□□ -1.42
CCDC62Q6P9F0 Y_RNA.472-201ENST00000384322 102 ntBASIC6.18□□□□□ -1.42
CCDC62Q6P9F0 SNORD65C-201ENST00000390962 71 ntBASIC6.18□□□□□ -1.42
CCDC62Q6P9F0 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
CCDC62Q6P9F0 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.18□□□□□ -1.42
CCDC62Q6P9F0 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms