Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC016772.1-201ENST00000444170 1261 ntBASIC6.44□□□□□ -1.38
MRE11P49959 RPL23AP23-201ENST00000452590 471 ntBASIC6.44□□□□□ -1.38
MRE11P49959 HIGD1AP8-201ENST00000453927 274 ntBASIC6.44□□□□□ -1.38
MRE11P49959 AC006463.2-201ENST00000473326 348 ntBASIC6.44□□□□□ -1.38
MRE11P49959 CBX1P5-201ENST00000475330 559 ntBASIC6.44□□□□□ -1.38
MRE11P49959 ATP5LP5-201ENST00000483050 299 ntBASIC6.44□□□□□ -1.38
MRE11P49959 AC091912.1-201ENST00000511351 248 ntBASIC6.44□□□□□ -1.38
MRE11P49959 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC6.44□□□□□ -1.38
MRE11P49959 KCTD9P6-201ENST00000522306 950 ntBASIC6.44□□□□□ -1.38
MRE11P49959 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC6.44□□□□□ -1.38
MRE11P49959 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC6.44□□□□□ -1.38
MRE11P49959 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.44□□□□□ -1.38
MRE11P49959 ZNF321P-202ENST00000550843 495 ntBASIC6.44□□□□□ -1.38
MRE11P49959 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.44□□□□□ -1.38
MRE11P49959 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.44□□□□□ -1.38
MRE11P49959 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.44□□□□□ -1.38
MRE11P49959 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.44□□□□□ -1.38
MRE11P49959 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.44□□□□□ -1.38
MRE11P49959 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC6.44□□□□□ -1.38
MRE11P49959 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.44□□□□□ -1.38
MRE11P49959 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.44□□□□□ -1.38
MRE11P49959 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.44□□□□□ -1.38
MRE11P49959 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.44□□□□□ -1.38
MRE11P49959 AC107952.2-201ENST00000606048 486 ntBASIC6.44□□□□□ -1.38
MRE11P49959 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.44□□□□□ -1.38
MRE11P49959 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC6.44□□□□□ -1.38
MRE11P49959 AC090510.2-201ENST00000617465 629 ntBASIC6.44□□□□□ -1.38
MRE11P49959 AC026585.1-201ENST00000619582 524 ntBASIC6.44□□□□□ -1.38
MRE11P49959 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC6.44□□□□□ -1.38
MRE11P49959 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
MRE11P49959 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.44□□□□□ -1.38
MRE11P49959 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
MRE11P49959 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
MRE11P49959 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
MRE11P49959 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
MRE11P49959 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC6.44□□□□□ -1.38
MRE11P49959 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
MRE11P49959 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
MRE11P49959 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
MRE11P49959 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.43□□□□□ -1.38
MRE11P49959 AC068870.1-201ENST00000563737 2455 ntBASIC6.43□□□□□ -1.38
MRE11P49959 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
MRE11P49959 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
MRE11P49959 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
MRE11P49959 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
MRE11P49959 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC6.43□□□□□ -1.38
MRE11P49959 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
MRE11P49959 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
MRE11P49959 SNORD116-1-201ENST00000384335 95 ntBASIC6.43□□□□□ -1.38
MRE11P49959 HMGB1P13-201ENST00000406019 642 ntBASIC6.43□□□□□ -1.38
MRE11P49959 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
MRE11P49959 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.43□□□□□ -1.38
MRE11P49959 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC6.43□□□□□ -1.38
MRE11P49959 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC6.43□□□□□ -1.38
MRE11P49959 AL445928.1-201ENST00000435545 222 ntBASIC6.43□□□□□ -1.38
MRE11P49959 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC6.43□□□□□ -1.38
MRE11P49959 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
MRE11P49959 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.43□□□□□ -1.38
MRE11P49959 OR7E116P-201ENST00000448529 957 ntBASIC6.43□□□□□ -1.38
MRE11P49959 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC6.43□□□□□ -1.38
MRE11P49959 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
MRE11P49959 AC113420.1-201ENST00000507903 571 ntBASIC6.43□□□□□ -1.38
MRE11P49959 HPRT1P1-201ENST00000509498 657 ntBASIC6.43□□□□□ -1.38
MRE11P49959 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC6.43□□□□□ -1.38
MRE11P49959 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC6.43□□□□□ -1.38
MRE11P49959 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC6.43□□□□□ -1.38
MRE11P49959 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC6.43□□□□□ -1.38
MRE11P49959 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC6.43□□□□□ -1.38
MRE11P49959 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC6.43□□□□□ -1.38
MRE11P49959 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC6.43□□□□□ -1.38
MRE11P49959 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC6.43□□□□□ -1.38
MRE11P49959 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.43□□□□□ -1.38
MRE11P49959 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC6.43□□□□□ -1.38
MRE11P49959 AC005034.4-201ENST00000603612 899 ntBASIC6.43□□□□□ -1.38
MRE11P49959 AC080013.3-201ENST00000606839 578 ntBASIC6.43□□□□□ -1.38
MRE11P49959 SSX9-202ENST00000608568 580 ntTSL 4 BASIC6.43□□□□□ -1.38
MRE11P49959 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.43□□□□□ -1.38
MRE11P49959 AL049539.1-201ENST00000611964 459 ntBASIC6.43□□□□□ -1.38
MRE11P49959 AC013470.4-201ENST00000619978 986 ntBASIC6.43□□□□□ -1.38
MRE11P49959 AL357562.1-201ENST00000624911 609 ntBASIC6.43□□□□□ -1.38
MRE11P49959 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.43□□□□□ -1.38
MRE11P49959 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.43□□□□□ -1.38
MRE11P49959 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC6.43□□□□□ -1.38
MRE11P49959 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.43□□□□□ -1.38
MRE11P49959 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
MRE11P49959 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.43□□□□□ -1.38
MRE11P49959 ZNF652P1-201ENST00000442420 1309 ntBASIC6.43□□□□□ -1.38
MRE11P49959 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
MRE11P49959 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
MRE11P49959 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
MRE11P49959 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
MRE11P49959 DDX43P2-201ENST00000604753 1354 ntBASIC6.43□□□□□ -1.38
MRE11P49959 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
MRE11P49959 AC004817.4-201ENST00000602396 3625 ntBASIC6.42□□□□□ -1.38
MRE11P49959 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
MRE11P49959 AC100778.3-201ENST00000580060 1750 ntBASIC6.42□□□□□ -1.38
MRE11P49959 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
MRE11P49959 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
MRE11P49959 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.42□□□□□ -1.38
MRE11P49959 OR5H2-201ENST00000355273 945 ntBASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms