Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
MT-ND1P03886 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.59□□□□□ -1.67
MT-ND1P03886 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
MT-ND1P03886 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
MT-ND1P03886 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
MT-ND1P03886 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
MT-ND1P03886 RN7SKP114-201ENST00000410327 279 ntBASIC4.59□□□□□ -1.67
MT-ND1P03886 Z68694.1-201ENST00000413929 841 ntBASIC4.59□□□□□ -1.67
MT-ND1P03886 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
MT-ND1P03886 RNF19BPX-201ENST00000426224 625 ntBASIC4.59□□□□□ -1.67
MT-ND1P03886 NPM1P22-201ENST00000427761 952 ntBASIC4.59□□□□□ -1.67
MT-ND1P03886 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
MT-ND1P03886 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.59□□□□□ -1.67
MT-ND1P03886 AC092162.1-201ENST00000432828 434 ntBASIC4.59□□□□□ -1.67
MT-ND1P03886 AC007563.3-201ENST00000433233 371 ntBASIC4.59□□□□□ -1.67
MT-ND1P03886 NMNAT1P2-201ENST00000435192 860 ntBASIC4.59□□□□□ -1.67
MT-ND1P03886 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.59□□□□□ -1.67
MT-ND1P03886 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.59□□□□□ -1.67
MT-ND1P03886 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.59□□□□□ -1.67
MT-ND1P03886 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.59□□□□□ -1.67
MT-ND1P03886 SETP20-201ENST00000457046 852 ntBASIC4.59□□□□□ -1.67
MT-ND1P03886 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.59□□□□□ -1.67
MT-ND1P03886 RPL23AP37-201ENST00000479658 549 ntBASIC4.59□□□□□ -1.67
MT-ND1P03886 RPL7P51-201ENST00000490532 749 ntBASIC4.59□□□□□ -1.67
MT-ND1P03886 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.59□□□□□ -1.67
MT-ND1P03886 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.59□□□□□ -1.67
MT-ND1P03886 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.59□□□□□ -1.67
MT-ND1P03886 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.59□□□□□ -1.67
MT-ND1P03886 SMG1P6-201ENST00000532337 2930 ntBASIC4.59□□□□□ -1.67
MT-ND1P03886 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
MT-ND1P03886 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
MT-ND1P03886 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.59□□□□□ -1.67
MT-ND1P03886 BTBD10P1-201ENST00000549824 1352 ntBASIC4.59□□□□□ -1.67
MT-ND1P03886 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.59□□□□□ -1.67
MT-ND1P03886 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.59□□□□□ -1.67
MT-ND1P03886 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.59□□□□□ -1.67
MT-ND1P03886 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC4.59□□□□□ -1.67
MT-ND1P03886 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.59□□□□□ -1.67
MT-ND1P03886 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.59□□□□□ -1.67
MT-ND1P03886 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.59□□□□□ -1.67
MT-ND1P03886 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
MT-ND1P03886 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.59□□□□□ -1.67
MT-ND1P03886 SNORD91B-202ENST00000608459 222 ntBASIC4.59□□□□□ -1.67
MT-ND1P03886 AC234782.5-201ENST00000617723 324 ntBASIC4.59□□□□□ -1.67
MT-ND1P03886 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.59□□□□□ -1.67
MT-ND1P03886 AC139713.2-215ENST00000641428 5037 ntBASIC4.59□□□□□ -1.68
MT-ND1P03886 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
MT-ND1P03886 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.59□□□□□ -1.68
MT-ND1P03886 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
MT-ND1P03886 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
MT-ND1P03886 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
MT-ND1P03886 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
MT-ND1P03886 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
MT-ND1P03886 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.58□□□□□ -1.68
MT-ND1P03886 AC009313.2-201ENST00000417893 1941 ntBASIC4.58□□□□□ -1.68
MT-ND1P03886 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.58□□□□□ -1.68
MT-ND1P03886 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
MT-ND1P03886 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
MT-ND1P03886 HSPD1P11-201ENST00000508643 1702 ntBASIC4.58□□□□□ -1.68
MT-ND1P03886 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
MT-ND1P03886 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
MT-ND1P03886 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
MT-ND1P03886 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
MT-ND1P03886 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.58□□□□□ -1.68
MT-ND1P03886 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
MT-ND1P03886 AC093719.1-202ENST00000392735 373 ntBASIC4.58□□□□□ -1.68
MT-ND1P03886 ATP5HP3-201ENST00000396994 486 ntBASIC4.58□□□□□ -1.68
MT-ND1P03886 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
MT-ND1P03886 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.58□□□□□ -1.68
MT-ND1P03886 AL590609.2-201ENST00000421430 368 ntBASIC4.58□□□□□ -1.68
MT-ND1P03886 AL356806.1-201ENST00000422524 916 ntBASIC4.58□□□□□ -1.68
MT-ND1P03886 AL590623.1-201ENST00000427864 105 ntBASIC4.58□□□□□ -1.68
MT-ND1P03886 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
MT-ND1P03886 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.58□□□□□ -1.68
MT-ND1P03886 AL606490.8-201ENST00000441624 319 ntBASIC4.58□□□□□ -1.68
MT-ND1P03886 RPL7L1P1-201ENST00000448259 785 ntBASIC4.58□□□□□ -1.68
MT-ND1P03886 IGHV5-78-201ENST00000450948 295 ntBASIC4.58□□□□□ -1.68
MT-ND1P03886 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.58□□□□□ -1.68
MT-ND1P03886 AC009127.1-201ENST00000467090 155 ntBASIC4.58□□□□□ -1.68
MT-ND1P03886 OR2AO1P-201ENST00000476497 403 ntBASIC4.58□□□□□ -1.68
MT-ND1P03886 RPS21P4-201ENST00000487122 248 ntBASIC4.58□□□□□ -1.68
MT-ND1P03886 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
MT-ND1P03886 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.58□□□□□ -1.68
MT-ND1P03886 COL6A4P2-205ENST00000509855 506 ntBASIC4.58□□□□□ -1.68
MT-ND1P03886 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC4.58□□□□□ -1.68
MT-ND1P03886 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.58□□□□□ -1.68
MT-ND1P03886 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.58□□□□□ -1.68
MT-ND1P03886 OR4A46P-201ENST00000527255 933 ntBASIC4.58□□□□□ -1.68
MT-ND1P03886 AC090022.1-201ENST00000546569 311 ntBASIC4.58□□□□□ -1.68
MT-ND1P03886 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.58□□□□□ -1.68
MT-ND1P03886 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.58□□□□□ -1.68
MT-ND1P03886 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.58□□□□□ -1.68
MT-ND1P03886 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.58□□□□□ -1.68
MT-ND1P03886 AC012414.7-202ENST00000622705 1090 ntBASIC4.58□□□□□ -1.68
MT-ND1P03886 AC005086.4-201ENST00000623065 213 ntBASIC4.58□□□□□ -1.68
MT-ND1P03886 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
MT-ND1P03886 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
MT-ND1P03886 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.58□□□□□ -1.68
MT-ND1P03886 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.58□□□□□ -1.68
MT-ND1P03886 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms