Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC018442.3-201ENST00000523025 183 ntBASIC4.78□□□□□ -1.64
SNX3O60493 HAUS1P3-201ENST00000523909 662 ntBASIC4.78□□□□□ -1.64
SNX3O60493 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.78□□□□□ -1.64
SNX3O60493 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.78□□□□□ -1.64
SNX3O60493 AC079148.1-201ENST00000565944 819 ntBASIC4.78□□□□□ -1.64
SNX3O60493 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC4.78□□□□□ -1.64
SNX3O60493 AC015912.2-201ENST00000571053 181 ntBASIC4.78□□□□□ -1.64
SNX3O60493 TMF1P1-201ENST00000576058 373 ntBASIC4.78□□□□□ -1.64
SNX3O60493 MIR3154-201ENST00000577829 84 ntBASIC4.78□□□□□ -1.64
SNX3O60493 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC4.78□□□□□ -1.64
SNX3O60493 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.78□□□□□ -1.64
SNX3O60493 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.78□□□□□ -1.64
SNX3O60493 AL669942.2-201ENST00000620352 697 ntBASIC4.78□□□□□ -1.64
SNX3O60493 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.78□□□□□ -1.64
SNX3O60493 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.78□□□□□ -1.64
SNX3O60493 TMEM30CP-203ENST00000637814 1035 ntBASIC4.78□□□□□ -1.64
SNX3O60493 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.78□□□□□ -1.64
SNX3O60493 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.78□□□□□ -1.64
SNX3O60493 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
SNX3O60493 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.78□□□□□ -1.64
SNX3O60493 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SNX3O60493 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.78□□□□□ -1.64
SNX3O60493 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
SNX3O60493 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.78□□□□□ -1.64
SNX3O60493 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
SNX3O60493 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SNX3O60493 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SNX3O60493 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SNX3O60493 RNA5SP319-201ENST00000362768 119 ntBASIC4.77□□□□□ -1.65
SNX3O60493 AC004386.1-201ENST00000393214 761 ntBASIC4.77□□□□□ -1.65
SNX3O60493 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.77□□□□□ -1.65
SNX3O60493 AC066692.1-201ENST00000421721 457 ntBASIC4.77□□□□□ -1.65
SNX3O60493 AL121882.1-201ENST00000422893 417 ntBASIC4.77□□□□□ -1.65
SNX3O60493 RPL7P57-201ENST00000423238 740 ntBASIC4.77□□□□□ -1.65
SNX3O60493 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.77□□□□□ -1.65
SNX3O60493 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SNX3O60493 AC012497.1-201ENST00000429392 575 ntBASIC4.77□□□□□ -1.65
SNX3O60493 FTLP19-201ENST00000433300 394 ntBASIC4.77□□□□□ -1.65
SNX3O60493 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.77□□□□□ -1.65
SNX3O60493 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.77□□□□□ -1.65
SNX3O60493 TCEA1P1-201ENST00000449716 880 ntBASIC4.77□□□□□ -1.65
SNX3O60493 AC093890.1-201ENST00000502554 540 ntBASIC4.77□□□□□ -1.65
SNX3O60493 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SNX3O60493 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC4.77□□□□□ -1.65
SNX3O60493 SNORA76.2-201ENST00000517095 137 ntBASIC4.77□□□□□ -1.65
SNX3O60493 RNU6-709P-201ENST00000517257 104 ntBASIC4.77□□□□□ -1.65
SNX3O60493 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.77□□□□□ -1.65
SNX3O60493 HIGD1AP18-201ENST00000520730 278 ntBASIC4.77□□□□□ -1.65
SNX3O60493 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.77□□□□□ -1.65
SNX3O60493 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.77□□□□□ -1.65
SNX3O60493 AC100770.1-201ENST00000532310 322 ntBASIC4.77□□□□□ -1.65
SNX3O60493 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
SNX3O60493 AC125612.1-201ENST00000547580 377 ntBASIC4.77□□□□□ -1.65
SNX3O60493 FKBP1BP1-201ENST00000553366 325 ntBASIC4.77□□□□□ -1.65
SNX3O60493 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.77□□□□□ -1.65
SNX3O60493 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.77□□□□□ -1.65
SNX3O60493 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.77□□□□□ -1.65
SNX3O60493 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.77□□□□□ -1.65
SNX3O60493 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SNX3O60493 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.77□□□□□ -1.65
SNX3O60493 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.77□□□□□ -1.65
SNX3O60493 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC4.77□□□□□ -1.65
SNX3O60493 RPL7P50-201ENST00000600588 727 ntBASIC4.77□□□□□ -1.65
SNX3O60493 AC005776.1-201ENST00000603164 290 ntBASIC4.77□□□□□ -1.65
SNX3O60493 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.77□□□□□ -1.65
SNX3O60493 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.77□□□□□ -1.65
SNX3O60493 AC015813.4-201ENST00000610469 179 ntBASIC4.77□□□□□ -1.65
SNX3O60493 AL109620.1-201ENST00000618738 1197 ntBASIC4.77□□□□□ -1.65
SNX3O60493 AL359757.1-201ENST00000623176 255 ntBASIC4.77□□□□□ -1.65
SNX3O60493 AC090617.9-201ENST00000623751 147 ntBASIC4.77□□□□□ -1.65
SNX3O60493 CYP4F35P-202ENST00000636121 390 ntBASIC4.77□□□□□ -1.65
SNX3O60493 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.77□□□□□ -1.65
SNX3O60493 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.77□□□□□ -1.65
SNX3O60493 OR13C1P-202ENST00000641378 2919 ntBASIC4.77□□□□□ -1.65
SNX3O60493 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SNX3O60493 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SNX3O60493 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SNX3O60493 BTBD10P1-201ENST00000549824 1352 ntBASIC4.77□□□□□ -1.65
SNX3O60493 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SNX3O60493 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SNX3O60493 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.77□□□□□ -1.65
SNX3O60493 AC090181.3-201ENST00000624777 1514 ntBASIC4.77□□□□□ -1.65
SNX3O60493 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC4.77□□□□□ -1.65
SNX3O60493 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SNX3O60493 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SNX3O60493 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SNX3O60493 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SNX3O60493 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SNX3O60493 AC068254.2-201ENST00000623938 3577 ntBASIC4.76□□□□□ -1.65
SNX3O60493 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
SNX3O60493 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SNX3O60493 RNU6-650P-201ENST00000365658 111 ntBASIC4.76□□□□□ -1.65
SNX3O60493 AL034374.1-201ENST00000406329 351 ntBASIC4.76□□□□□ -1.65
SNX3O60493 RN7SKP114-201ENST00000410327 279 ntBASIC4.76□□□□□ -1.65
SNX3O60493 SDHDP6-201ENST00000414693 480 ntBASIC4.76□□□□□ -1.65
SNX3O60493 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.76□□□□□ -1.65
SNX3O60493 CACYBPP1-201ENST00000438592 684 ntBASIC4.76□□□□□ -1.65
SNX3O60493 MTCYBP12-201ENST00000440559 1134 ntBASIC4.76□□□□□ -1.65
SNX3O60493 AC023512.1-201ENST00000444513 499 ntBASIC4.76□□□□□ -1.65
SNX3O60493 AL354714.3-201ENST00000447284 493 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms