Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 MIR4311-201ENST00000580794 100 ntBASIC5.54□□□□□ -1.52
PHGDHO43175 AP001269.3-201ENST00000588718 329 ntBASIC5.54□□□□□ -1.52
PHGDHO43175 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC5.54□□□□□ -1.52
PHGDHO43175 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PHGDHO43175 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PHGDHO43175 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC5.54□□□□□ -1.52
PHGDHO43175 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.54□□□□□ -1.52
PHGDHO43175 AL139124.1-201ENST00000609123 421 ntBASIC5.54□□□□□ -1.52
PHGDHO43175 AC010632.3-201ENST00000611377 369 ntBASIC5.54□□□□□ -1.52
PHGDHO43175 AL162574.1-201ENST00000615702 950 ntBASIC5.54□□□□□ -1.52
PHGDHO43175 AL158163.2-201ENST00000619110 700 ntBASIC5.54□□□□□ -1.52
PHGDHO43175 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.54□□□□□ -1.52
PHGDHO43175 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC5.54□□□□□ -1.52
PHGDHO43175 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.54□□□□□ -1.52
PHGDHO43175 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
PHGDHO43175 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PHGDHO43175 AC002525.1-201ENST00000624392 1622 ntBASIC5.54□□□□□ -1.52
PHGDHO43175 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
PHGDHO43175 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.54□□□□□ -1.52
PHGDHO43175 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PHGDHO43175 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PHGDHO43175 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PHGDHO43175 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PHGDHO43175 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PHGDHO43175 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
PHGDHO43175 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.53□□□□□ -1.52
PHGDHO43175 MAPK10-338ENST00000641647 3362 ntBASIC5.53□□□□□ -1.52
PHGDHO43175 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PHGDHO43175 AC092681.1-201ENST00000297369 291 ntBASIC5.53□□□□□ -1.52
PHGDHO43175 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PHGDHO43175 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.53□□□□□ -1.52
PHGDHO43175 RNU6-413P-201ENST00000384115 107 ntBASIC5.53□□□□□ -1.52
PHGDHO43175 OOSP1-201ENST00000398992 1270 ntBASIC5.53□□□□□ -1.52
PHGDHO43175 AL596448.1-201ENST00000415024 392 ntBASIC5.53□□□□□ -1.52
PHGDHO43175 AC079809.1-201ENST00000415468 276 ntBASIC5.53□□□□□ -1.52
PHGDHO43175 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC5.53□□□□□ -1.52
PHGDHO43175 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.53□□□□□ -1.52
PHGDHO43175 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.53□□□□□ -1.52
PHGDHO43175 GAPDHP49-201ENST00000421421 961 ntBASIC5.53□□□□□ -1.52
PHGDHO43175 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.53□□□□□ -1.52
PHGDHO43175 AC127526.2-201ENST00000426436 775 ntBASIC5.53□□□□□ -1.52
PHGDHO43175 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.53□□□□□ -1.52
PHGDHO43175 RPL7P56-201ENST00000429441 717 ntBASIC5.53□□□□□ -1.52
PHGDHO43175 AC069154.1-201ENST00000432914 542 ntBASIC5.53□□□□□ -1.52
PHGDHO43175 AC006335.2-201ENST00000437993 330 ntBASIC5.53□□□□□ -1.52
PHGDHO43175 DNAJA1P5-201ENST00000440278 943 ntBASIC5.53□□□□□ -1.52
PHGDHO43175 AC073465.2-201ENST00000440938 498 ntBASIC5.53□□□□□ -1.52
PHGDHO43175 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC5.53□□□□□ -1.52
PHGDHO43175 RHEBP2-201ENST00000450289 600 ntBASIC5.53□□□□□ -1.52
PHGDHO43175 AZGP1P2-201ENST00000454506 345 ntBASIC5.53□□□□□ -1.52
PHGDHO43175 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.53□□□□□ -1.52
PHGDHO43175 AL035404.1-201ENST00000497982 568 ntBASIC5.53□□□□□ -1.52
PHGDHO43175 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PHGDHO43175 NENFP3-201ENST00000503735 313 ntBASIC5.53□□□□□ -1.52
PHGDHO43175 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.53□□□□□ -1.52
PHGDHO43175 AC034244.1-201ENST00000507687 207 ntBASIC5.53□□□□□ -1.52
PHGDHO43175 AC023632.1-201ENST00000518463 375 ntBASIC5.53□□□□□ -1.52
PHGDHO43175 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.53□□□□□ -1.52
PHGDHO43175 OR4A2P-201ENST00000527276 913 ntBASIC5.53□□□□□ -1.52
PHGDHO43175 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC5.53□□□□□ -1.52
PHGDHO43175 NANOGNBP2-201ENST00000544753 553 ntBASIC5.53□□□□□ -1.52
PHGDHO43175 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.53□□□□□ -1.52
PHGDHO43175 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.53□□□□□ -1.52
PHGDHO43175 AC090695.1-201ENST00000561269 1222 ntBASIC5.53□□□□□ -1.52
PHGDHO43175 AC018552.1-201ENST00000562099 811 ntBASIC5.53□□□□□ -1.52
PHGDHO43175 DPPA2P4-201ENST00000563717 878 ntBASIC5.53□□□□□ -1.52
PHGDHO43175 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.53□□□□□ -1.52
PHGDHO43175 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.53□□□□□ -1.52
PHGDHO43175 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.53□□□□□ -1.52
PHGDHO43175 AL353726.1-201ENST00000614041 1000 ntBASIC5.53□□□□□ -1.52
PHGDHO43175 AC022079.1-201ENST00000621546 602 ntBASIC5.53□□□□□ -1.52
PHGDHO43175 AC079416.3-201ENST00000624479 549 ntBASIC5.53□□□□□ -1.52
PHGDHO43175 AC073593.1-201ENST00000624500 411 ntBASIC5.53□□□□□ -1.52
PHGDHO43175 AC092608.3-201ENST00000625017 386 ntBASIC5.53□□□□□ -1.52
PHGDHO43175 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.53□□□□□ -1.52
PHGDHO43175 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
PHGDHO43175 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PHGDHO43175 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
PHGDHO43175 IFIT1P1-201ENST00000400497 1449 ntBASIC5.53□□□□□ -1.52
PHGDHO43175 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PHGDHO43175 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.53□□□□□ -1.52
PHGDHO43175 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PHGDHO43175 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.53□□□□□ -1.52
PHGDHO43175 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.53□□□□□ -1.52
PHGDHO43175 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
PHGDHO43175 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PHGDHO43175 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PHGDHO43175 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.53□□□□□ -1.52
PHGDHO43175 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
PHGDHO43175 MTCO1P7-201ENST00000419523 1542 ntBASIC5.53□□□□□ -1.52
PHGDHO43175 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PHGDHO43175 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PHGDHO43175 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PHGDHO43175 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PHGDHO43175 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PHGDHO43175 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PHGDHO43175 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PHGDHO43175 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
PHGDHO43175 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.52□□□□□ -1.53
PHGDHO43175 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms