Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 SNORD42A-201ENST00000459584 64 ntBASIC6.76□□□□□ -1.33
SOX1O00570 ARL4AP2-201ENST00000507378 601 ntBASIC6.76□□□□□ -1.33
SOX1O00570 HIGD1AP14-201ENST00000507617 282 ntBASIC6.76□□□□□ -1.33
SOX1O00570 AC138866.2-201ENST00000508650 584 ntBASIC6.76□□□□□ -1.33
SOX1O00570 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC6.76□□□□□ -1.33
SOX1O00570 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.76□□□□□ -1.33
SOX1O00570 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.76□□□□□ -1.33
SOX1O00570 AC008802.1-201ENST00000519121 791 ntBASIC6.76□□□□□ -1.33
SOX1O00570 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC6.76□□□□□ -1.33
SOX1O00570 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC6.76□□□□□ -1.33
SOX1O00570 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC6.76□□□□□ -1.33
SOX1O00570 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC6.76□□□□□ -1.33
SOX1O00570 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.76□□□□□ -1.33
SOX1O00570 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.76□□□□□ -1.33
SOX1O00570 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
SOX1O00570 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.76□□□□□ -1.33
SOX1O00570 RN7SL708P-201ENST00000580952 299 ntBASIC6.76□□□□□ -1.33
SOX1O00570 FKBP1AP1-201ENST00000594588 318 ntBASIC6.76□□□□□ -1.33
SOX1O00570 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SOX1O00570 AC011453.2-201ENST00000603737 729 ntBASIC6.76□□□□□ -1.33
SOX1O00570 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.76□□□□□ -1.33
SOX1O00570 AC100827.5-201ENST00000615883 426 ntBASIC6.76□□□□□ -1.33
SOX1O00570 AL136221.1-201ENST00000621449 509 ntBASIC6.76□□□□□ -1.33
SOX1O00570 AP001784.1-201ENST00000624107 428 ntBASIC6.76□□□□□ -1.33
SOX1O00570 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC6.76□□□□□ -1.33
SOX1O00570 HMG20A-202ENST00000381714 4112 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SOX1O00570 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SOX1O00570 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SOX1O00570 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
SOX1O00570 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SOX1O00570 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
SOX1O00570 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.76□□□□□ -1.33
SOX1O00570 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC6.76□□□□□ -1.33
SOX1O00570 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SOX1O00570 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
SOX1O00570 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
SOX1O00570 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC6.76□□□□□ -1.33
SOX1O00570 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SOX1O00570 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SOX1O00570 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SOX1O00570 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SOX1O00570 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SOX1O00570 LINC00269-201ENST00000399711 2173 ntTSL 2 BASIC6.75□□□□□ -1.33
SOX1O00570 AL359976.1-201ENST00000418655 3528 ntBASIC6.75□□□□□ -1.33
SOX1O00570 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SOX1O00570 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
SOX1O00570 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SOX1O00570 AL669831.5-218ENST00000591702 1873 ntBASIC6.75□□□□□ -1.33
SOX1O00570 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SOX1O00570 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SOX1O00570 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SOX1O00570 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SOX1O00570 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
SOX1O00570 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SOX1O00570 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC6.75□□□□□ -1.33
SOX1O00570 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
SOX1O00570 MT-TL1-201ENST00000386347 75 ntBASIC6.75□□□□□ -1.33
SOX1O00570 RNU6-876P-201ENST00000391295 104 ntBASIC6.75□□□□□ -1.33
SOX1O00570 AL034403.1-201ENST00000399414 885 ntBASIC6.75□□□□□ -1.33
SOX1O00570 OR7E101P-201ENST00000400428 513 ntBASIC6.75□□□□□ -1.33
SOX1O00570 RN7SKP121-201ENST00000410842 305 ntBASIC6.75□□□□□ -1.33
SOX1O00570 RPL17P12-201ENST00000413391 526 ntBASIC6.75□□□□□ -1.33
SOX1O00570 AL139128.1-201ENST00000413921 941 ntBASIC6.75□□□□□ -1.33
SOX1O00570 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC6.75□□□□□ -1.33
SOX1O00570 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.75□□□□□ -1.33
SOX1O00570 AL139148.1-201ENST00000427122 680 ntBASIC6.75□□□□□ -1.33
SOX1O00570 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.75□□□□□ -1.33
SOX1O00570 MTND4LP10-201ENST00000435146 291 ntBASIC6.75□□□□□ -1.33
SOX1O00570 AC239367.2-201ENST00000447309 705 ntBASIC6.75□□□□□ -1.33
SOX1O00570 RPL7P31-201ENST00000450192 724 ntBASIC6.75□□□□□ -1.33
SOX1O00570 AC013267.1-201ENST00000458227 267 ntBASIC6.75□□□□□ -1.33
SOX1O00570 AC022415.1-202ENST00000486612 523 ntBASIC6.75□□□□□ -1.33
SOX1O00570 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC6.75□□□□□ -1.33
SOX1O00570 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
SOX1O00570 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC6.75□□□□□ -1.33
SOX1O00570 MTND3P22-201ENST00000510932 243 ntBASIC6.75□□□□□ -1.33
SOX1O00570 SNORA70.20-201ENST00000516848 126 ntBASIC6.75□□□□□ -1.33
SOX1O00570 AC025260.1-201ENST00000548858 430 ntBASIC6.75□□□□□ -1.33
SOX1O00570 PSMB7P1-201ENST00000556349 514 ntBASIC6.75□□□□□ -1.33
SOX1O00570 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.75□□□□□ -1.33
SOX1O00570 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.75□□□□□ -1.33
SOX1O00570 AL138976.2-201ENST00000563989 694 ntBASIC6.75□□□□□ -1.33
SOX1O00570 ULK4P2-202ENST00000564187 492 ntBASIC6.75□□□□□ -1.33
SOX1O00570 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.75□□□□□ -1.33
SOX1O00570 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.75□□□□□ -1.33
SOX1O00570 AL049539.1-201ENST00000611964 459 ntBASIC6.75□□□□□ -1.33
SOX1O00570 MIR378J-201ENST00000611988 109 ntBASIC6.75□□□□□ -1.33
SOX1O00570 uc_338.18-201ENST00000615451 175 ntBASIC6.75□□□□□ -1.33
SOX1O00570 AC068870.2-201ENST00000620635 389 ntBASIC6.75□□□□□ -1.33
SOX1O00570 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
SOX1O00570 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SOX1O00570 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SOX1O00570 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.75□□□□□ -1.33
SOX1O00570 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SOX1O00570 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SOX1O00570 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
SOX1O00570 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC6.75□□□□□ -1.33
SOX1O00570 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SOX1O00570 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SOX1O00570 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms