Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 AL390316.1-201ENST00000406279 553 ntBASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 AL034374.1-201ENST00000406329 351 ntBASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 Y_RNA.625-201ENST00000411256 107 ntBASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 HYALP1-201ENST00000417674 1279 ntBASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 AL590609.2-201ENST00000421430 368 ntBASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 HMGB3P9-201ENST00000441799 583 ntBASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 BX842559.2-201ENST00000451418 605 ntBASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 AC021205.1-201ENST00000468797 348 ntBASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 PCNAP1-201ENST00000505363 709 ntBASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 EIF4A2P3-201ENST00000525903 1055 ntBASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 NPM1P35-201ENST00000533043 868 ntBASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 LSM3P2-201ENST00000551246 273 ntBASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 AC040958.1-201ENST00000561102 201 ntBASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 AC022884.2-201ENST00000578535 580 ntBASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 AC104785.1-201ENST00000603220 588 ntBASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 AC005021.1-201ENST00000608730 355 ntBASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 MIR6820-201ENST00000611508 62 ntBASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 AC131238.1-201ENST00000617135 328 ntBASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 AC119674.1-220ENST00000641502 1048 ntBASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 AC107027.3-201ENST00000565095 3473 ntBASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 AC022417.1-201ENST00000624768 1303 ntBASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 DDX18P3-201ENST00000404856 2007 ntBASIC4.62□□□□□ -1.67
NPIPA2E9PIF3 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 IRF5P1-201ENST00000504852 2164 ntBASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 OR5T3-201ENST00000303059 1023 ntBASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 RN7SKP113-201ENST00000363891 295 ntBASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 MIR421-201ENST00000365696 85 ntBASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 SNORA66-201ENST00000384792 133 ntBASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 RPL21P67-201ENST00000402896 478 ntBASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 NPM1P40-201ENST00000412758 733 ntBASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 RPL12P9-201ENST00000412942 488 ntBASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 AL590806.1-201ENST00000415818 853 ntBASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 COX6B1P1-201ENST00000415962 213 ntBASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 CHEK2P3-201ENST00000416118 248 ntBASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 OR2AM1P-201ENST00000422137 422 ntBASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 RNF19BPX-201ENST00000426224 625 ntBASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 AL360081.1-201ENST00000428299 555 ntBASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 RHOT1P3-201ENST00000436571 331 ntBASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 AC114878.1-201ENST00000441166 358 ntBASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 RPL34P20-201ENST00000442771 351 ntBASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 AC108161.1-201ENST00000461060 402 ntBASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 AC096741.1-201ENST00000472250 846 ntBASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 RPL7P16-201ENST00000479738 738 ntBASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 AC105233.1-201ENST00000498840 781 ntBASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 AC140172.1-201ENST00000502928 141 ntBASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 AC097173.1-201ENST00000505862 819 ntBASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 COX6B1P5-201ENST00000509843 249 ntBASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 MTCYBP19-201ENST00000517463 1124 ntBASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.61□□□□□ -1.67
NPIPA2E9PIF3 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms