Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 RNU6-1251P-201ENST00000364502 107 ntBASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 PPCS-201ENST00000372556 984 ntTSL 2 BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 RN7SKP97-201ENST00000410966 333 ntBASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 RN7SKP293-201ENST00000411389 296 ntBASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 NPM1P40-201ENST00000412758 733 ntBASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 AC106883.1-201ENST00000418805 562 ntBASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 OR5M12P-201ENST00000423388 929 ntBASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 MTND1P26-201ENST00000440488 538 ntBASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 HMGN1P36-201ENST00000446623 298 ntBASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 AC114322.1-201ENST00000506771 926 ntBASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 IGLVIV-64-201ENST00000518581 301 ntBASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 MTND1P24-201ENST00000552175 861 ntBASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 AC027243.2-201ENST00000602530 724 ntBASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 AP004372.1-201ENST00000604842 844 ntBASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 AC005021.1-201ENST00000608730 355 ntBASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 AL096803.3-201ENST00000609032 532 ntBASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 AC126175.1-201ENST00000617041 758 ntBASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 RMST_5.1-201ENST00000618704 126 ntBASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 AC099654.9-201ENST00000637055 678 ntBASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 AC074101.1-201ENST00000637861 241 ntBASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 KARSP1-201ENST00000451871 1752 ntBASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 AL356317.1-201ENST00000396110 1436 ntBASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
MRPS28Q9Y2Q9 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 AC092747.4-201ENST00000620519 1861 ntBASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 RNA5SP335-201ENST00000363817 110 ntBASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 RNA5SP90-201ENST00000364801 99 ntBASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 MIR143-201ENST00000385300 106 ntBASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 AC092642.1-201ENST00000392417 425 ntBASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 RPL10P10-201ENST00000403509 664 ntBASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 RPL5P19-201ENST00000404228 893 ntBASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 U3.32-201ENST00000408116 212 ntBASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 VN1R51P-201ENST00000411675 945 ntBASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 MTCO2P8-201ENST00000412213 658 ntBASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 MTND4LP13-201ENST00000425022 298 ntBASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 AC013262.1-201ENST00000426710 252 ntBASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 NANOGP4-201ENST00000427230 913 ntBASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 BX119904.1-201ENST00000432026 348 ntBASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 MTCYBP15-201ENST00000433123 1127 ntBASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 RPS29P10-201ENST00000439197 166 ntBASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 AC064862.4-201ENST00000442180 334 ntBASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 AC093166.2-201ENST00000455969 1017 ntBASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 AC104982.1-201ENST00000478775 574 ntBASIC4.43□□□□□ -1.7
MRPS28Q9Y2Q9 AC005412.2-201ENST00000492004 341 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms