Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 MIR4646-201ENST00000580775 63 ntBASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 AP000919.1-201ENST00000582850 985 ntBASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 AP002884.5-201ENST00000595053 1132 ntBASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 AL713998.2-201ENST00000604538 1198 ntBASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 AC010424.2-201ENST00000607594 443 ntBASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 AC211433.2-201ENST00000608433 387 ntBASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 NF1P10-201ENST00000613227 742 ntBASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 INTS6P1-201ENST00000504674 2530 ntBASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 AL672167.1-205ENST00000641112 3080 ntBASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 AC099654.2-201ENST00000433031 1980 ntBASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
TRAPPC4Q9Y296 AL592182.3-201ENST00000642132 3304 ntBASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 RN7SKP95-201ENST00000362860 303 ntBASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 HMGB3P7-201ENST00000400214 611 ntBASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 RNA5SP345-201ENST00000410646 108 ntBASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 CHEK2P3-201ENST00000416118 248 ntBASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 RBMY2QP-201ENST00000429799 1147 ntBASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 UBE2V2P1-201ENST00000434717 398 ntBASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 TRY2P-201ENST00000448860 689 ntBASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 SLC25A18P1-201ENST00000449385 454 ntBASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 AL591623.2-201ENST00000449978 222 ntBASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 AC239798.3-201ENST00000454459 408 ntBASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 RN7SL329P-201ENST00000467740 299 ntBASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 AC116562.1-201ENST00000485355 781 ntBASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 AC104971.1-201ENST00000495117 578 ntBASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 GAPDHP56-201ENST00000506031 988 ntBASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 MRPS33P2-201ENST00000507850 322 ntBASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 MYL12AP1-201ENST00000518490 515 ntBASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 AC008033.2-201ENST00000542626 177 ntBASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 EDDM3DP-201ENST00000554692 434 ntBASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 AC016180.1-201ENST00000567945 403 ntBASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 SNORA74C-1-201ENST00000580726 201 ntBASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 AC008758.3-201ENST00000507003 1829 ntBASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 AL929601.4-201ENST00000613011 1341 ntBASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 TLK1P1-201ENST00000456760 2440 ntBASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TRAPPC4Q9Y296 Z98755.1-201ENST00000407015 1384 ntBASIC4.4□□□□□ -1.7
TRAPPC4Q9Y296 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.4□□□□□ -1.7
TRAPPC4Q9Y296 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
TRAPPC4Q9Y296 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
TRAPPC4Q9Y296 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.4□□□□□ -1.7
TRAPPC4Q9Y296 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 RNA5SP123-201ENST00000363244 119 ntBASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 AL589647.1-201ENST00000402485 466 ntBASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 GTF2IP5-201ENST00000414608 731 ntBASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 SNRPFP2-201ENST00000440710 251 ntBASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 AC002553.2-201ENST00000453217 340 ntBASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 RN7SL41P-201ENST00000476144 297 ntBASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 OR9N1P-201ENST00000491296 333 ntBASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 AC026688.1-201ENST00000520639 1168 ntBASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 AP000676.2-201ENST00000529711 301 ntBASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 CYCSP28-201ENST00000534284 321 ntBASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 AC044860.2-201ENST00000561005 179 ntBASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 AC010547.7-201ENST00000570323 333 ntBASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 NPM1P45-201ENST00000583151 559 ntBASIC4.4□□□□□ -1.71
TRAPPC4Q9Y296 SLC25A36P1-201ENST00000590111 465 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms