Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 XKRYP6-201ENST00000440468 1116 ntBASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 XKRYP3-201ENST00000442113 1116 ntBASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 AL589765.3-201ENST00000446084 462 ntBASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 AC004980.3-201ENST00000447046 365 ntBASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 BUD31P2-201ENST00000449374 300 ntBASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 CCRL1P1-201ENST00000449542 1053 ntBASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 TPT1P13-201ENST00000449760 499 ntBASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 AC069277.2-201ENST00000454211 432 ntBASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 AC021660.1-201ENST00000465006 554 ntBASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 RN7SL738P-201ENST00000470264 297 ntBASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 RNU6-513P-201ENST00000516104 104 ntBASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 BNIP3P1-201ENST00000547295 580 ntBASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 AC009268.1-201ENST00000561352 1203 ntBASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 CD24P2-201ENST00000565486 219 ntBASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 AC020915.5-201ENST00000596836 964 ntBASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 SNX6P1-201ENST00000601728 1224 ntBASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 AC018695.5-201ENST00000605872 315 ntBASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 AC007620.3-201ENST00000608131 497 ntBASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 A2MP1-204ENST00000566278 4130 ntBASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
NPIPA1Q9UND3 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 BMS1P3-201ENST00000372011 932 ntBASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 AL607077.1-201ENST00000401718 499 ntBASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 RNU6-564P-201ENST00000410983 104 ntBASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 AC013470.3-201ENST00000420252 1194 ntBASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 COX6CP13-201ENST00000428703 226 ntBASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 AC063943.1-201ENST00000465434 453 ntBASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 RN7SL860P-201ENST00000473738 223 ntBASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 LARP7P4-201ENST00000481075 878 ntBASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 AC008897.1-201ENST00000494006 347 ntBASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 ENPP7P11-201ENST00000505915 627 ntBASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 RNA5SP43-201ENST00000516559 110 ntBASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 AC079075.1-201ENST00000559543 878 ntBASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 AL161616.1-201ENST00000611867 286 ntBASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 uc_338.18-201ENST00000615451 175 ntBASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 AL356274.1-201ENST00000617064 410 ntBASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 AC104260.2-201ENST00000623551 3497 ntBASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 AP000648.2-201ENST00000624182 404 ntBASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
NPIPA1Q9UND3 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.59□□□□□ -1.68
NPIPA1Q9UND3 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NPIPA1Q9UND3 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NPIPA1Q9UND3 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
NPIPA1Q9UND3 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NPIPA1Q9UND3 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NPIPA1Q9UND3 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
NPIPA1Q9UND3 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
NPIPA1Q9UND3 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.58□□□□□ -1.68
NPIPA1Q9UND3 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
NPIPA1Q9UND3 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NPIPA1Q9UND3 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
NPIPA1Q9UND3 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
NPIPA1Q9UND3 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.58□□□□□ -1.68
NPIPA1Q9UND3 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
NPIPA1Q9UND3 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms