Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
VTA1Q9NP79 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
VTA1Q9NP79 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
VTA1Q9NP79 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC6.21□□□□□ -1.42
VTA1Q9NP79 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
VTA1Q9NP79 RPL23P2-201ENST00000320371 421 ntBASIC6.21□□□□□ -1.42
VTA1Q9NP79 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VTA1Q9NP79 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC6.21□□□□□ -1.42
VTA1Q9NP79 MTND4P13-201ENST00000402078 1023 ntBASIC6.21□□□□□ -1.42
VTA1Q9NP79 Z75741.2-201ENST00000417272 1167 ntBASIC6.21□□□□□ -1.42
VTA1Q9NP79 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC6.21□□□□□ -1.42
VTA1Q9NP79 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC6.21□□□□□ -1.42
VTA1Q9NP79 SRSF1P1-201ENST00000424058 520 ntBASIC6.21□□□□□ -1.42
VTA1Q9NP79 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC6.21□□□□□ -1.42
VTA1Q9NP79 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC6.21□□□□□ -1.42
VTA1Q9NP79 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VTA1Q9NP79 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC6.21□□□□□ -1.42
VTA1Q9NP79 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC6.21□□□□□ -1.42
VTA1Q9NP79 AL035090.1-201ENST00000454835 332 ntBASIC6.21□□□□□ -1.42
VTA1Q9NP79 CDC42P1-201ENST00000456658 548 ntBASIC6.21□□□□□ -1.42
VTA1Q9NP79 RN7SL808P-201ENST00000496066 299 ntBASIC6.21□□□□□ -1.42
VTA1Q9NP79 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VTA1Q9NP79 HPRT1P2-201ENST00000505250 544 ntBASIC6.21□□□□□ -1.42
VTA1Q9NP79 HMGB1P44-201ENST00000508597 572 ntBASIC6.21□□□□□ -1.42
VTA1Q9NP79 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.21□□□□□ -1.42
VTA1Q9NP79 AC104108.1-201ENST00000509930 412 ntBASIC6.21□□□□□ -1.42
VTA1Q9NP79 PRELID3BP4-201ENST00000515476 571 ntBASIC6.21□□□□□ -1.42
VTA1Q9NP79 SCARNA16.4-201ENST00000516956 187 ntBASIC6.21□□□□□ -1.42
VTA1Q9NP79 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.21□□□□□ -1.42
VTA1Q9NP79 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC6.21□□□□□ -1.42
VTA1Q9NP79 AC090695.1-201ENST00000561269 1222 ntBASIC6.21□□□□□ -1.42
VTA1Q9NP79 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC6.21□□□□□ -1.42
VTA1Q9NP79 AGGF1P6-201ENST00000569213 976 ntBASIC6.21□□□□□ -1.42
VTA1Q9NP79 AC061975.8-201ENST00000587058 721 ntBASIC6.21□□□□□ -1.42
VTA1Q9NP79 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.21□□□□□ -1.42
VTA1Q9NP79 AL583832.1-201ENST00000603227 784 ntBASIC6.21□□□□□ -1.42
VTA1Q9NP79 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VTA1Q9NP79 AP002505.2-201ENST00000623585 696 ntBASIC6.21□□□□□ -1.42
VTA1Q9NP79 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.21□□□□□ -1.42
VTA1Q9NP79 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.21□□□□□ -1.42
VTA1Q9NP79 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC6.21□□□□□ -1.42
VTA1Q9NP79 CU459211.1-201ENST00000635667 749 ntBASIC6.21□□□□□ -1.42
VTA1Q9NP79 AC074101.1-201ENST00000637861 241 ntBASIC6.21□□□□□ -1.42
VTA1Q9NP79 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
VTA1Q9NP79 GTF2H2B-203ENST00000508065 1432 ntBASIC6.21□□□□□ -1.42
VTA1Q9NP79 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.21□□□□□ -1.42
VTA1Q9NP79 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
VTA1Q9NP79 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
VTA1Q9NP79 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VTA1Q9NP79 MSL3P1-202ENST00000440028 1468 ntBASIC6.21□□□□□ -1.42
VTA1Q9NP79 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
VTA1Q9NP79 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
VTA1Q9NP79 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
VTA1Q9NP79 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
VTA1Q9NP79 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
VTA1Q9NP79 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.2□□□□□ -1.42
VTA1Q9NP79 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
VTA1Q9NP79 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VTA1Q9NP79 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
VTA1Q9NP79 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VTA1Q9NP79 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VTA1Q9NP79 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
VTA1Q9NP79 RNU1-136P-201ENST00000384181 164 ntBASIC6.2□□□□□ -1.42
VTA1Q9NP79 RNU6-244P-201ENST00000391028 104 ntBASIC6.2□□□□□ -1.42
VTA1Q9NP79 U3.23-201ENST00000391132 200 ntBASIC6.2□□□□□ -1.42
VTA1Q9NP79 LRRC37BP1-201ENST00000398851 714 ntBASIC6.2□□□□□ -1.42
VTA1Q9NP79 AL133388.1-201ENST00000404509 287 ntBASIC6.2□□□□□ -1.42
VTA1Q9NP79 RN7SKP125-201ENST00000410481 302 ntBASIC6.2□□□□□ -1.42
VTA1Q9NP79 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.2□□□□□ -1.42
VTA1Q9NP79 AC013404.1-201ENST00000413068 249 ntBASIC6.2□□□□□ -1.42
VTA1Q9NP79 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.2□□□□□ -1.42
VTA1Q9NP79 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC6.2□□□□□ -1.42
VTA1Q9NP79 MRPS21P2-201ENST00000424704 264 ntBASIC6.2□□□□□ -1.42
VTA1Q9NP79 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC6.2□□□□□ -1.42
VTA1Q9NP79 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC6.2□□□□□ -1.42
VTA1Q9NP79 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC6.2□□□□□ -1.42
VTA1Q9NP79 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VTA1Q9NP79 RPL23AP44-201ENST00000482216 473 ntBASIC6.2□□□□□ -1.42
VTA1Q9NP79 RPS23P1-201ENST00000491662 432 ntBASIC6.2□□□□□ -1.42
VTA1Q9NP79 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VTA1Q9NP79 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC6.2□□□□□ -1.42
VTA1Q9NP79 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC6.2□□□□□ -1.42
VTA1Q9NP79 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC6.2□□□□□ -1.42
VTA1Q9NP79 MTND6P2-201ENST00000512226 524 ntBASIC6.2□□□□□ -1.42
VTA1Q9NP79 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
VTA1Q9NP79 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
VTA1Q9NP79 AC008083.2-201ENST00000546707 476 ntBASIC6.2□□□□□ -1.42
VTA1Q9NP79 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.2□□□□□ -1.42
VTA1Q9NP79 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.2□□□□□ -1.42
VTA1Q9NP79 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC6.2□□□□□ -1.42
VTA1Q9NP79 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC6.2□□□□□ -1.42
VTA1Q9NP79 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC6.2□□□□□ -1.42
VTA1Q9NP79 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC6.2□□□□□ -1.42
VTA1Q9NP79 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC6.2□□□□□ -1.42
VTA1Q9NP79 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.2□□□□□ -1.42
VTA1Q9NP79 MIR4700-201ENST00000578311 74 ntBASIC6.2□□□□□ -1.42
VTA1Q9NP79 RN7SL708P-201ENST00000580952 299 ntBASIC6.2□□□□□ -1.42
VTA1Q9NP79 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC6.2□□□□□ -1.42
VTA1Q9NP79 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.2□□□□□ -1.42
VTA1Q9NP79 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms