Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CHD8Q9HCK8 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.4□□□□□ -1.71
CHD8Q9HCK8 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.4□□□□□ -1.71
CHD8Q9HCK8 DUX4L52-201ENST00000549363 777 ntBASIC4.4□□□□□ -1.71
CHD8Q9HCK8 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.4□□□□□ -1.71
CHD8Q9HCK8 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.4□□□□□ -1.71
CHD8Q9HCK8 AC104984.5-201ENST00000586878 94 ntBASIC4.4□□□□□ -1.71
CHD8Q9HCK8 MIR7975-201ENST00000619350 68 ntBASIC4.4□□□□□ -1.71
CHD8Q9HCK8 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC4.4□□□□□ -1.71
CHD8Q9HCK8 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC4.4□□□□□ -1.71
CHD8Q9HCK8 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
CHD8Q9HCK8 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CHD8Q9HCK8 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CHD8Q9HCK8 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.39□□□□□ -1.71
CHD8Q9HCK8 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
CHD8Q9HCK8 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHD8Q9HCK8 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.39□□□□□ -1.71
CHD8Q9HCK8 AL160175.1-201ENST00000428124 247 ntBASIC4.39□□□□□ -1.71
CHD8Q9HCK8 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.39□□□□□ -1.71
CHD8Q9HCK8 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC4.39□□□□□ -1.71
CHD8Q9HCK8 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.39□□□□□ -1.71
CHD8Q9HCK8 AC010487.1-201ENST00000594408 1172 ntBASIC4.39□□□□□ -1.71
CHD8Q9HCK8 AC010424.2-201ENST00000607594 443 ntBASIC4.39□□□□□ -1.71
CHD8Q9HCK8 AL049794.2-201ENST00000616301 365 ntBASIC4.39□□□□□ -1.71
CHD8Q9HCK8 AC112484.5-201ENST00000624189 228 ntBASIC4.39□□□□□ -1.71
CHD8Q9HCK8 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.39□□□□□ -1.71
CHD8Q9HCK8 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC4.39□□□□□ -1.71
CHD8Q9HCK8 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.39□□□□□ -1.71
CHD8Q9HCK8 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC4.39□□□□□ -1.71
CHD8Q9HCK8 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CHD8Q9HCK8 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.39□□□□□ -1.71
CHD8Q9HCK8 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHD8Q9HCK8 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CHD8Q9HCK8 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CHD8Q9HCK8 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CHD8Q9HCK8 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CHD8Q9HCK8 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CHD8Q9HCK8 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHD8Q9HCK8 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
CHD8Q9HCK8 MTCO1P46-201ENST00000451639 1491 ntBASIC4.39□□□□□ -1.71
CHD8Q9HCK8 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.39□□□□□ -1.71
CHD8Q9HCK8 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.39□□□□□ -1.71
CHD8Q9HCK8 HMGN2P31-201ENST00000432430 273 ntBASIC4.39□□□□□ -1.71
CHD8Q9HCK8 FTH1P16-201ENST00000435241 552 ntBASIC4.39□□□□□ -1.71
CHD8Q9HCK8 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.39□□□□□ -1.71
CHD8Q9HCK8 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.39□□□□□ -1.71
CHD8Q9HCK8 IGKV2D-19-201ENST00000523346 262 ntBASIC4.39□□□□□ -1.71
CHD8Q9HCK8 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.39□□□□□ -1.71
CHD8Q9HCK8 FAM27B-201ENST00000610601 213 ntBASIC4.39□□□□□ -1.71
CHD8Q9HCK8 CASC22-202ENST00000628396 802 ntTSL 5 BASIC4.39□□□□□ -1.71
CHD8Q9HCK8 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CHD8Q9HCK8 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHD8Q9HCK8 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHD8Q9HCK8 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHD8Q9HCK8 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CHD8Q9HCK8 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CHD8Q9HCK8 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHD8Q9HCK8 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHD8Q9HCK8 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC4.38□□□□□ -1.71
CHD8Q9HCK8 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHD8Q9HCK8 AL391262.1-201ENST00000556558 1992 ntBASIC4.38□□□□□ -1.71
CHD8Q9HCK8 RN7SKP17-201ENST00000411242 351 ntBASIC4.38□□□□□ -1.71
CHD8Q9HCK8 USP9YP36-201ENST00000424581 829 ntBASIC4.38□□□□□ -1.71
CHD8Q9HCK8 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CHD8Q9HCK8 USP9YP31-201ENST00000431405 881 ntBASIC4.38□□□□□ -1.71
CHD8Q9HCK8 AC104306.1-201ENST00000449702 371 ntBASIC4.38□□□□□ -1.71
CHD8Q9HCK8 RPL37P3-201ENST00000456825 293 ntBASIC4.38□□□□□ -1.71
CHD8Q9HCK8 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.38□□□□□ -1.71
CHD8Q9HCK8 RPS27AP13-201ENST00000498403 237 ntBASIC4.38□□□□□ -1.71
CHD8Q9HCK8 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.38□□□□□ -1.71
CHD8Q9HCK8 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC4.38□□□□□ -1.71
CHD8Q9HCK8 AC011626.1-201ENST00000604710 562 ntBASIC4.38□□□□□ -1.71
CHD8Q9HCK8 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CHD8Q9HCK8 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHD8Q9HCK8 MTCO1P24-201ENST00000515438 1558 ntBASIC4.38□□□□□ -1.71
CHD8Q9HCK8 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC4.38□□□□□ -1.71
CHD8Q9HCK8 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CHD8Q9HCK8 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHD8Q9HCK8 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC4.38□□□□□ -1.71
CHD8Q9HCK8 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CHD8Q9HCK8 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC4.38□□□□□ -1.71
CHD8Q9HCK8 PLXNC1-205ENST00000547057 2455 ntTSL 2 BASIC4.38□□□□□ -1.71
CHD8Q9HCK8 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHD8Q9HCK8 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
CHD8Q9HCK8 AC024560.2-201ENST00000507981 1497 ntBASIC4.38□□□□□ -1.71
CHD8Q9HCK8 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHD8Q9HCK8 RNA5SP126-201ENST00000365092 109 ntBASIC4.38□□□□□ -1.71
CHD8Q9HCK8 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.38□□□□□ -1.71
CHD8Q9HCK8 ATP5HP3-201ENST00000396994 486 ntBASIC4.38□□□□□ -1.71
CHD8Q9HCK8 AC068533.1-201ENST00000418542 415 ntBASIC4.38□□□□□ -1.71
CHD8Q9HCK8 AL139095.3-201ENST00000419672 1203 ntBASIC4.38□□□□□ -1.71
CHD8Q9HCK8 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.38□□□□□ -1.71
CHD8Q9HCK8 LINC02210-201ENST00000444561 288 ntBASIC4.38□□□□□ -1.71
CHD8Q9HCK8 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC4.38□□□□□ -1.71
CHD8Q9HCK8 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHD8Q9HCK8 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.38□□□□□ -1.71
CHD8Q9HCK8 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.38□□□□□ -1.71
CHD8Q9HCK8 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.38□□□□□ -1.71
CHD8Q9HCK8 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.38□□□□□ -1.71
CHD8Q9HCK8 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms