Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 HMGB3P6-201ENST00000444896 598 ntBASIC6.3□□□□□ -1.4
ERCC4Q92889 OR51B8P-201ENST00000449892 769 ntBASIC6.3□□□□□ -1.4
ERCC4Q92889 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC6.3□□□□□ -1.4
ERCC4Q92889 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC6.3□□□□□ -1.4
ERCC4Q92889 RPS20P4-201ENST00000461659 355 ntBASIC6.3□□□□□ -1.4
ERCC4Q92889 LSM3P4-201ENST00000502948 309 ntBASIC6.3□□□□□ -1.4
ERCC4Q92889 ENSA-211ENST00000503345 793 ntTSL 3 BASIC6.3□□□□□ -1.4
ERCC4Q92889 AC091951.3-201ENST00000504093 246 ntBASIC6.3□□□□□ -1.4
ERCC4Q92889 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.3□□□□□ -1.4
ERCC4Q92889 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.3□□□□□ -1.4
ERCC4Q92889 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.3□□□□□ -1.4
ERCC4Q92889 AP003396.4-201ENST00000527574 265 ntBASIC6.3□□□□□ -1.4
ERCC4Q92889 AC027369.2-201ENST00000528030 440 ntBASIC6.3□□□□□ -1.4
ERCC4Q92889 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ERCC4Q92889 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC6.3□□□□□ -1.4
ERCC4Q92889 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC6.3□□□□□ -1.4
ERCC4Q92889 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC6.3□□□□□ -1.4
ERCC4Q92889 AC023813.2-201ENST00000564321 469 ntBASIC6.3□□□□□ -1.4
ERCC4Q92889 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
ERCC4Q92889 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC6.3□□□□□ -1.4
ERCC4Q92889 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC6.3□□□□□ -1.4
ERCC4Q92889 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC6.3□□□□□ -1.4
ERCC4Q92889 AC068020.1-201ENST00000594215 661 ntBASIC6.3□□□□□ -1.4
ERCC4Q92889 AL020997.3-201ENST00000602843 359 ntBASIC6.3□□□□□ -1.4
ERCC4Q92889 AC130352.1-201ENST00000602979 661 ntBASIC6.3□□□□□ -1.4
ERCC4Q92889 AC018638.7-201ENST00000605836 1114 ntBASIC6.3□□□□□ -1.4
ERCC4Q92889 AC010632.3-201ENST00000611377 369 ntBASIC6.3□□□□□ -1.4
ERCC4Q92889 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.3□□□□□ -1.4
ERCC4Q92889 AC090116.1-201ENST00000615679 446 ntBASIC6.3□□□□□ -1.4
ERCC4Q92889 OR8G7P-201ENST00000616658 848 ntBASIC6.3□□□□□ -1.4
ERCC4Q92889 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC6.3□□□□□ -1.4
ERCC4Q92889 MIR1322-201ENST00000638013 71 ntBASIC6.3□□□□□ -1.4
ERCC4Q92889 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ERCC4Q92889 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ERCC4Q92889 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC6.3□□□□□ -1.4
ERCC4Q92889 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.3□□□□□ -1.4
ERCC4Q92889 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ERCC4Q92889 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC6.3□□□□□ -1.4
ERCC4Q92889 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
ERCC4Q92889 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ERCC4Q92889 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
ERCC4Q92889 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
ERCC4Q92889 AL390862.1-201ENST00000635467 1469 ntBASIC6.29□□□□□ -1.4
ERCC4Q92889 AL022322.2-201ENST00000624072 20397 ntBASIC6.29□□□□□ -1.4
ERCC4Q92889 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.29□□□□□ -1.4
ERCC4Q92889 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
ERCC4Q92889 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.29□□□□□ -1.4
ERCC4Q92889 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
ERCC4Q92889 SPATA2P1-201ENST00000431223 2055 ntBASIC6.29□□□□□ -1.4
ERCC4Q92889 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.29□□□□□ -1.4
ERCC4Q92889 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ERCC4Q92889 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.29□□□□□ -1.4
ERCC4Q92889 SNORA64.1-201ENST00000362600 132 ntBASIC6.29□□□□□ -1.4
ERCC4Q92889 RNA5SP30-201ENST00000365552 115 ntBASIC6.29□□□□□ -1.4
ERCC4Q92889 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
ERCC4Q92889 RNU6-224P-201ENST00000384055 107 ntBASIC6.29□□□□□ -1.4
ERCC4Q92889 AC004386.1-201ENST00000393214 761 ntBASIC6.29□□□□□ -1.4
ERCC4Q92889 AC233289.1-201ENST00000403700 508 ntBASIC6.29□□□□□ -1.4
ERCC4Q92889 MIR1282-201ENST00000408865 101 ntBASIC6.29□□□□□ -1.4
ERCC4Q92889 RN7SKP182-201ENST00000410772 298 ntBASIC6.29□□□□□ -1.4
ERCC4Q92889 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.29□□□□□ -1.4
ERCC4Q92889 RPA2P2-201ENST00000419698 796 ntBASIC6.29□□□□□ -1.4
ERCC4Q92889 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC6.29□□□□□ -1.4
ERCC4Q92889 HMGN2P27-201ENST00000427352 270 ntBASIC6.29□□□□□ -1.4
ERCC4Q92889 AC115283.1-201ENST00000427353 400 ntBASIC6.29□□□□□ -1.4
ERCC4Q92889 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC6.29□□□□□ -1.4
ERCC4Q92889 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
ERCC4Q92889 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
ERCC4Q92889 USP9YP28-201ENST00000435142 589 ntBASIC6.29□□□□□ -1.4
ERCC4Q92889 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC6.29□□□□□ -1.4
ERCC4Q92889 RPS10P18-201ENST00000442662 495 ntBASIC6.29□□□□□ -1.4
ERCC4Q92889 AC023512.1-201ENST00000444513 499 ntBASIC6.29□□□□□ -1.4
ERCC4Q92889 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC6.29□□□□□ -1.4
ERCC4Q92889 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.29□□□□□ -1.4
ERCC4Q92889 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.29□□□□□ -1.4
ERCC4Q92889 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC6.29□□□□□ -1.4
ERCC4Q92889 AL133217.1-201ENST00000450980 425 ntBASIC6.29□□□□□ -1.4
ERCC4Q92889 SNORD125-201ENST00000459538 96 ntBASIC6.29□□□□□ -1.4
ERCC4Q92889 AL122020.1-201ENST00000472287 459 ntBASIC6.29□□□□□ -1.4
ERCC4Q92889 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.29□□□□□ -1.4
ERCC4Q92889 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.29□□□□□ -1.4
ERCC4Q92889 PSMA2P2-201ENST00000504319 686 ntBASIC6.29□□□□□ -1.4
ERCC4Q92889 UGT2A3P7-201ENST00000510485 734 ntBASIC6.29□□□□□ -1.4
ERCC4Q92889 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.29□□□□□ -1.4
ERCC4Q92889 OR5BM1P-201ENST00000512021 366 ntBASIC6.29□□□□□ -1.4
ERCC4Q92889 SEPT10P1-201ENST00000517342 1162 ntBASIC6.29□□□□□ -1.4
ERCC4Q92889 AC010306.1-201ENST00000523223 1117 ntBASIC6.29□□□□□ -1.4
ERCC4Q92889 AP000926.4-201ENST00000527351 454 ntBASIC6.29□□□□□ -1.4
ERCC4Q92889 REXO2-218ENST00000544827 880 ntTSL 3 BASIC6.29□□□□□ -1.4
ERCC4Q92889 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
ERCC4Q92889 NDUFAF4P1-201ENST00000559425 519 ntBASIC6.29□□□□□ -1.4
ERCC4Q92889 AC090695.1-201ENST00000561269 1222 ntBASIC6.29□□□□□ -1.4
ERCC4Q92889 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.29□□□□□ -1.4
ERCC4Q92889 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC6.29□□□□□ -1.4
ERCC4Q92889 AC063977.5-201ENST00000601044 974 ntBASIC6.29□□□□□ -1.4
ERCC4Q92889 AC121247.2-201ENST00000604776 136 ntBASIC6.29□□□□□ -1.4
ERCC4Q92889 AL133507.1-201ENST00000605269 557 ntBASIC6.29□□□□□ -1.4
ERCC4Q92889 AC010245.2-201ENST00000606908 1167 ntBASIC6.29□□□□□ -1.4
ERCC4Q92889 AL159169.2-201ENST00000610061 1269 ntBASIC6.29□□□□□ -1.4
ERCC4Q92889 TUSC7.1-201ENST00000610969 165 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 149.8 ms