Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 RNA5SP366-201ENST00000365454 123 ntBASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 AC011998.1-201ENST00000433403 117 ntBASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 AC016550.3-201ENST00000515706 767 ntBASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 CARD16-203ENST00000525374 503 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 AC012409.3-201ENST00000611343 981 ntBASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 RN7SKP153-201ENST00000365026 316 ntBASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 AC022133.1-201ENST00000490961 571 ntBASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 RN7SL441P-201ENST00000492388 296 ntBASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 RN7SL558P-201ENST00000497468 299 ntBASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 AC130364.2-201ENST00000528639 604 ntBASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 AC011471.1-201ENST00000585766 187 ntBASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 AL683813.2-201ENST00000605245 502 ntBASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 AC096577.2-201ENST00000611455 153 ntBASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 AL133243.1-201ENST00000614487 366 ntBASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 AL023881.1-201ENST00000621088 301 ntBASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 AC004836.1-201ENST00000623032 634 ntBASIC3.93□□□□□ -1.78
CCDC168Q8NDH2 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 MIR372-201ENST00000362225 67 ntBASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 RNU1-130P-201ENST00000363930 160 ntBASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 SNORA9-201ENST00000384215 133 ntBASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 AL603766.1-201ENST00000407763 664 ntBASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 ARAFP2-201ENST00000440565 559 ntBASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 RNU1-6P-201ENST00000516290 144 ntBASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 AC107016.1-201ENST00000550463 337 ntBASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 AP003497.2-201ENST00000624220 967 ntBASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 OR56B2P-202ENST00000641377 2453 ntBASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 MT-RNR1-201ENST00000389680 954 ntBASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 PTMAP2-201ENST00000397627 327 ntBASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 RPL37P1-201ENST00000432310 284 ntBASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 AL500522.2-201ENST00000448562 343 ntBASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.92□□□□□ -1.78
CCDC168Q8NDH2 MIR3200-201ENST00000580767 85 ntBASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms