Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VSX2P58304 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.59□□□□□ -1.67
VSX2P58304 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.59□□□□□ -1.67
VSX2P58304 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
VSX2P58304 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
VSX2P58304 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VSX2P58304 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
VSX2P58304 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
VSX2P58304 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VSX2P58304 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC4.59□□□□□ -1.67
VSX2P58304 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.59□□□□□ -1.67
VSX2P58304 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VSX2P58304 RN7SKP100-201ENST00000411258 284 ntBASIC4.59□□□□□ -1.67
VSX2P58304 RPL36AP10-201ENST00000421785 322 ntBASIC4.59□□□□□ -1.67
VSX2P58304 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.59□□□□□ -1.67
VSX2P58304 AL451139.1-201ENST00000434718 346 ntBASIC4.59□□□□□ -1.67
VSX2P58304 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.59□□□□□ -1.67
VSX2P58304 AL450263.2-201ENST00000439400 589 ntBASIC4.59□□□□□ -1.67
VSX2P58304 ARAFP2-201ENST00000440565 559 ntBASIC4.59□□□□□ -1.67
VSX2P58304 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.59□□□□□ -1.67
VSX2P58304 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.59□□□□□ -1.67
VSX2P58304 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.59□□□□□ -1.67
VSX2P58304 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.59□□□□□ -1.67
VSX2P58304 RPS5P7-201ENST00000456664 608 ntBASIC4.59□□□□□ -1.67
VSX2P58304 TLK1P1-201ENST00000456760 2440 ntBASIC4.59□□□□□ -1.67
VSX2P58304 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
VSX2P58304 HMGB3P16-201ENST00000508037 287 ntBASIC4.59□□□□□ -1.67
VSX2P58304 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VSX2P58304 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.59□□□□□ -1.67
VSX2P58304 RNA5SP464-201ENST00000516251 108 ntBASIC4.59□□□□□ -1.67
VSX2P58304 BUD31P1-201ENST00000521828 359 ntBASIC4.59□□□□□ -1.67
VSX2P58304 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.59□□□□□ -1.67
VSX2P58304 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
VSX2P58304 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
VSX2P58304 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
VSX2P58304 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.59□□□□□ -1.67
VSX2P58304 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.59□□□□□ -1.67
VSX2P58304 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.59□□□□□ -1.67
VSX2P58304 AC239803.2-201ENST00000610161 430 ntBASIC4.59□□□□□ -1.67
VSX2P58304 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.59□□□□□ -1.67
VSX2P58304 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
VSX2P58304 MIR6820-201ENST00000611508 62 ntBASIC4.59□□□□□ -1.67
VSX2P58304 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
VSX2P58304 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.59□□□□□ -1.68
VSX2P58304 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
VSX2P58304 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.58□□□□□ -1.68
VSX2P58304 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VSX2P58304 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.58□□□□□ -1.68
VSX2P58304 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
VSX2P58304 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
VSX2P58304 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
VSX2P58304 Y_RNA.625-201ENST00000411256 107 ntBASIC4.58□□□□□ -1.68
VSX2P58304 LINC00993-201ENST00000420453 540 ntBASIC4.58□□□□□ -1.68
VSX2P58304 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.58□□□□□ -1.68
VSX2P58304 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.58□□□□□ -1.68
VSX2P58304 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.58□□□□□ -1.68
VSX2P58304 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.58□□□□□ -1.68
VSX2P58304 GYG1P1-201ENST00000460864 698 ntBASIC4.58□□□□□ -1.68
VSX2P58304 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.58□□□□□ -1.68
VSX2P58304 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.58□□□□□ -1.68
VSX2P58304 AC104971.1-201ENST00000495117 578 ntBASIC4.58□□□□□ -1.68
VSX2P58304 AC091868.1-201ENST00000508746 304 ntBASIC4.58□□□□□ -1.68
VSX2P58304 SOX5P1-201ENST00000524155 1127 ntBASIC4.58□□□□□ -1.68
VSX2P58304 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.58□□□□□ -1.68
VSX2P58304 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.58□□□□□ -1.68
VSX2P58304 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.58□□□□□ -1.68
VSX2P58304 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.58□□□□□ -1.68
VSX2P58304 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.58□□□□□ -1.68
VSX2P58304 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.58□□□□□ -1.68
VSX2P58304 AL049830.4-201ENST00000555149 351 ntBASIC4.58□□□□□ -1.68
VSX2P58304 AC093249.4-201ENST00000564755 259 ntBASIC4.58□□□□□ -1.68
VSX2P58304 RN7SL802P-201ENST00000577858 299 ntBASIC4.58□□□□□ -1.68
VSX2P58304 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.58□□□□□ -1.68
VSX2P58304 AC244517.3-201ENST00000616254 1235 ntBASIC4.58□□□□□ -1.68
VSX2P58304 AL121890.2-201ENST00000617644 465 ntBASIC4.58□□□□□ -1.68
VSX2P58304 AP001005.3-201ENST00000622049 129 ntBASIC4.58□□□□□ -1.68
VSX2P58304 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.58□□□□□ -1.68
VSX2P58304 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.58□□□□□ -1.68
VSX2P58304 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.58□□□□□ -1.68
VSX2P58304 AC000123.3-201ENST00000624029 4975 ntBASIC4.58□□□□□ -1.68
VSX2P58304 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.58□□□□□ -1.68
VSX2P58304 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VSX2P58304 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
VSX2P58304 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.58□□□□□ -1.68
VSX2P58304 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.57□□□□□ -1.68
VSX2P58304 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
VSX2P58304 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VSX2P58304 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VSX2P58304 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.57□□□□□ -1.68
VSX2P58304 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VSX2P58304 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
VSX2P58304 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
VSX2P58304 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VSX2P58304 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VSX2P58304 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
VSX2P58304 RNU1-82P-201ENST00000390851 165 ntBASIC4.57□□□□□ -1.68
VSX2P58304 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VSX2P58304 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.57□□□□□ -1.68
VSX2P58304 RSU1P3-201ENST00000412878 835 ntBASIC4.57□□□□□ -1.68
VSX2P58304 RPA2P2-201ENST00000419698 796 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms