Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.65□□□□□ -1.67
PKNOX1P55347 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.65□□□□□ -1.67
PKNOX1P55347 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
PKNOX1P55347 RPL7P11-201ENST00000437586 658 ntBASIC4.65□□□□□ -1.67
PKNOX1P55347 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.65□□□□□ -1.67
PKNOX1P55347 AC005008.1-201ENST00000456151 612 ntBASIC4.65□□□□□ -1.67
PKNOX1P55347 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PKNOX1P55347 AC140172.1-201ENST00000502928 141 ntBASIC4.65□□□□□ -1.67
PKNOX1P55347 MRPS33P2-201ENST00000507850 322 ntBASIC4.65□□□□□ -1.67
PKNOX1P55347 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.65□□□□□ -1.67
PKNOX1P55347 NPM1P52-201ENST00000518264 846 ntBASIC4.65□□□□□ -1.67
PKNOX1P55347 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.65□□□□□ -1.67
PKNOX1P55347 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.65□□□□□ -1.67
PKNOX1P55347 GSTP1P1-201ENST00000548078 319 ntBASIC4.65□□□□□ -1.67
PKNOX1P55347 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.65□□□□□ -1.67
PKNOX1P55347 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.65□□□□□ -1.67
PKNOX1P55347 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.65□□□□□ -1.67
PKNOX1P55347 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.65□□□□□ -1.67
PKNOX1P55347 AC026979.4-201ENST00000606555 645 ntBASIC4.65□□□□□ -1.67
PKNOX1P55347 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.65□□□□□ -1.67
PKNOX1P55347 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC4.65□□□□□ -1.67
PKNOX1P55347 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.65□□□□□ -1.67
PKNOX1P55347 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
PKNOX1P55347 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.65□□□□□ -1.67
PKNOX1P55347 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
PKNOX1P55347 MAPK10-303ENST00000641324 3959 ntBASIC4.64□□□□□ -1.67
PKNOX1P55347 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PKNOX1P55347 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PKNOX1P55347 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
PKNOX1P55347 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
PKNOX1P55347 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.64□□□□□ -1.67
PKNOX1P55347 RPL23P2-201ENST00000320371 421 ntBASIC4.64□□□□□ -1.67
PKNOX1P55347 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
PKNOX1P55347 OR13C3-201ENST00000374781 1108 ntBASIC4.64□□□□□ -1.67
PKNOX1P55347 AC114755.2-201ENST00000413520 361 ntBASIC4.64□□□□□ -1.67
PKNOX1P55347 RPL7P57-201ENST00000423238 740 ntBASIC4.64□□□□□ -1.67
PKNOX1P55347 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.64□□□□□ -1.67
PKNOX1P55347 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.64□□□□□ -1.67
PKNOX1P55347 AC093414.1-201ENST00000434712 514 ntBASIC4.64□□□□□ -1.67
PKNOX1P55347 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.64□□□□□ -1.67
PKNOX1P55347 FCF1P7-201ENST00000451185 558 ntBASIC4.64□□□□□ -1.67
PKNOX1P55347 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.64□□□□□ -1.67
PKNOX1P55347 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.64□□□□□ -1.67
PKNOX1P55347 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.64□□□□□ -1.67
PKNOX1P55347 BX284632.1-201ENST00000478218 541 ntBASIC4.64□□□□□ -1.67
PKNOX1P55347 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
PKNOX1P55347 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.64□□□□□ -1.67
PKNOX1P55347 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.64□□□□□ -1.67
PKNOX1P55347 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.64□□□□□ -1.67
PKNOX1P55347 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.64□□□□□ -1.67
PKNOX1P55347 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PKNOX1P55347 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.64□□□□□ -1.67
PKNOX1P55347 AC093249.4-201ENST00000564755 259 ntBASIC4.64□□□□□ -1.67
PKNOX1P55347 MIR4310-201ENST00000582950 57 ntBASIC4.64□□□□□ -1.67
PKNOX1P55347 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.64□□□□□ -1.67
PKNOX1P55347 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.64□□□□□ -1.67
PKNOX1P55347 COX6CP4-201ENST00000605798 228 ntBASIC4.64□□□□□ -1.67
PKNOX1P55347 AC009163.6-201ENST00000612367 342 ntBASIC4.64□□□□□ -1.67
PKNOX1P55347 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PKNOX1P55347 EIF3FP1-201ENST00000613970 806 ntBASIC4.64□□□□□ -1.67
PKNOX1P55347 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
PKNOX1P55347 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
PKNOX1P55347 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PKNOX1P55347 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
PKNOX1P55347 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.64□□□□□ -1.67
PKNOX1P55347 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.63□□□□□ -1.67
PKNOX1P55347 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
PKNOX1P55347 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
PKNOX1P55347 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
PKNOX1P55347 Z95327.2-201ENST00000414579 1873 ntBASIC4.63□□□□□ -1.67
PKNOX1P55347 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
PKNOX1P55347 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
PKNOX1P55347 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PKNOX1P55347 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PKNOX1P55347 RCC2P2-201ENST00000422174 918 ntBASIC4.63□□□□□ -1.67
PKNOX1P55347 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.63□□□□□ -1.67
PKNOX1P55347 AC109462.1-201ENST00000491087 368 ntBASIC4.63□□□□□ -1.67
PKNOX1P55347 AC011411.1-201ENST00000509592 876 ntBASIC4.63□□□□□ -1.67
PKNOX1P55347 RN7SKP66-201ENST00000516681 231 ntBASIC4.63□□□□□ -1.67
PKNOX1P55347 HMGB1P19-201ENST00000517578 577 ntBASIC4.63□□□□□ -1.67
PKNOX1P55347 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.63□□□□□ -1.67
PKNOX1P55347 BUD31P1-201ENST00000521828 359 ntBASIC4.63□□□□□ -1.67
PKNOX1P55347 AC013701.1-201ENST00000522657 465 ntBASIC4.63□□□□□ -1.67
PKNOX1P55347 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.63□□□□□ -1.67
PKNOX1P55347 TRAV11-201ENST00000539512 339 ntBASIC4.63□□□□□ -1.67
PKNOX1P55347 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.63□□□□□ -1.67
PKNOX1P55347 RN7SL802P-201ENST00000577858 299 ntBASIC4.63□□□□□ -1.67
PKNOX1P55347 AC009303.3-201ENST00000591103 736 ntBASIC4.63□□□□□ -1.67
PKNOX1P55347 AC130352.1-201ENST00000602979 661 ntBASIC4.63□□□□□ -1.67
PKNOX1P55347 SUMO2P15-201ENST00000604285 278 ntBASIC4.63□□□□□ -1.67
PKNOX1P55347 AC007497.1-201ENST00000610421 561 ntBASIC4.63□□□□□ -1.67
PKNOX1P55347 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.63□□□□□ -1.67
PKNOX1P55347 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.63□□□□□ -1.67
PKNOX1P55347 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.63□□□□□ -1.67
PKNOX1P55347 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.63□□□□□ -1.67
PKNOX1P55347 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
PKNOX1P55347 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.63□□□□□ -1.67
PKNOX1P55347 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.63□□□□□ -1.67
PKNOX1P55347 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PKNOX1P55347 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms