Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.1□□□□□ -1.59
CLCNKAP51800 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.1□□□□□ -1.59
CLCNKAP51800 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.1□□□□□ -1.59
CLCNKAP51800 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLCNKAP51800 BMS1P7-201ENST00000602440 1052 ntBASIC5.1□□□□□ -1.59
CLCNKAP51800 AC011626.1-201ENST00000604710 562 ntBASIC5.1□□□□□ -1.59
CLCNKAP51800 AL158050.2-201ENST00000605336 568 ntBASIC5.1□□□□□ -1.59
CLCNKAP51800 AC017076.1-201ENST00000607613 578 ntBASIC5.1□□□□□ -1.59
CLCNKAP51800 AC034229.4-201ENST00000607861 441 ntBASIC5.1□□□□□ -1.59
CLCNKAP51800 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.1□□□□□ -1.59
CLCNKAP51800 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.1□□□□□ -1.59
CLCNKAP51800 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.1□□□□□ -1.59
CLCNKAP51800 AC018926.1-201ENST00000616335 435 ntBASIC5.1□□□□□ -1.59
CLCNKAP51800 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.1□□□□□ -1.59
CLCNKAP51800 AP002799.1-201ENST00000623552 423 ntBASIC5.1□□□□□ -1.59
CLCNKAP51800 CASC19-222ENST00000641321 1173 ntBASIC5.1□□□□□ -1.59
CLCNKAP51800 AC112198.2-201ENST00000426589 6996 ntBASIC5.1□□□□□ -1.59
CLCNKAP51800 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLCNKAP51800 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CLCNKAP51800 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
CLCNKAP51800 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLCNKAP51800 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLCNKAP51800 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLCNKAP51800 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLCNKAP51800 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLCNKAP51800 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLCNKAP51800 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLCNKAP51800 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
CLCNKAP51800 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLCNKAP51800 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLCNKAP51800 HSPA8P17-201ENST00000427029 1382 ntBASIC5.09□□□□□ -1.59
CLCNKAP51800 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLCNKAP51800 SNORA58B-201ENST00000364259 136 ntBASIC5.09□□□□□ -1.59
CLCNKAP51800 SNORA72.3-201ENST00000365074 132 ntBASIC5.09□□□□□ -1.59
CLCNKAP51800 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CLCNKAP51800 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CLCNKAP51800 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.09□□□□□ -1.59
CLCNKAP51800 RNFT1P2-201ENST00000443064 757 ntBASIC5.09□□□□□ -1.59
CLCNKAP51800 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.09□□□□□ -1.59
CLCNKAP51800 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.09□□□□□ -1.59
CLCNKAP51800 AC069304.1-201ENST00000491593 704 ntBASIC5.09□□□□□ -1.59
CLCNKAP51800 SCARNA1-201ENST00000517138 166 ntBASIC5.09□□□□□ -1.59
CLCNKAP51800 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.09□□□□□ -1.59
CLCNKAP51800 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.09□□□□□ -1.59
CLCNKAP51800 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.09□□□□□ -1.59
CLCNKAP51800 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.09□□□□□ -1.59
CLCNKAP51800 AP002373.2-201ENST00000541631 1060 ntBASIC5.09□□□□□ -1.59
CLCNKAP51800 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.09□□□□□ -1.59
CLCNKAP51800 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.09□□□□□ -1.59
CLCNKAP51800 AC023158.1-201ENST00000561632 1025 ntBASIC5.09□□□□□ -1.59
CLCNKAP51800 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.09□□□□□ -1.59
CLCNKAP51800 AC006272.2-201ENST00000594725 163 ntBASIC5.09□□□□□ -1.59
CLCNKAP51800 AC087763.1-201ENST00000603391 286 ntBASIC5.09□□□□□ -1.59
CLCNKAP51800 AP004372.1-201ENST00000604842 844 ntBASIC5.09□□□□□ -1.59
CLCNKAP51800 BX323046.1-201ENST00000610145 535 ntBASIC5.09□□□□□ -1.59
CLCNKAP51800 AC005156.1-201ENST00000613371 573 ntBASIC5.09□□□□□ -1.59
CLCNKAP51800 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.09□□□□□ -1.59
CLCNKAP51800 AC118658.2-201ENST00000618697 459 ntBASIC5.09□□□□□ -1.59
CLCNKAP51800 MIR6839-201ENST00000620425 113 ntBASIC5.09□□□□□ -1.59
CLCNKAP51800 AC090617.9-201ENST00000623751 147 ntBASIC5.09□□□□□ -1.59
CLCNKAP51800 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLCNKAP51800 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CLCNKAP51800 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CLCNKAP51800 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CLCNKAP51800 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CLCNKAP51800 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLCNKAP51800 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CLCNKAP51800 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLCNKAP51800 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CLCNKAP51800 THAP12P5-201ENST00000405864 2275 ntBASIC5.08□□□□□ -1.6
CLCNKAP51800 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLCNKAP51800 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.08□□□□□ -1.6
CLCNKAP51800 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLCNKAP51800 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLCNKAP51800 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLCNKAP51800 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.08□□□□□ -1.6
CLCNKAP51800 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLCNKAP51800 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.08□□□□□ -1.6
CLCNKAP51800 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
CLCNKAP51800 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.08□□□□□ -1.6
CLCNKAP51800 OR1L6-202ENST00000373684 1044 ntBASIC5.08□□□□□ -1.6
CLCNKAP51800 RNA5SP241-201ENST00000391326 114 ntBASIC5.08□□□□□ -1.6
CLCNKAP51800 AL078599.1-201ENST00000402075 293 ntBASIC5.08□□□□□ -1.6
CLCNKAP51800 RNU4-27P-201ENST00000410889 139 ntBASIC5.08□□□□□ -1.6
CLCNKAP51800 GPS2P1-201ENST00000411761 986 ntBASIC5.08□□□□□ -1.6
CLCNKAP51800 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.08□□□□□ -1.6
CLCNKAP51800 SFR1P2-201ENST00000421841 730 ntBASIC5.08□□□□□ -1.6
CLCNKAP51800 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC5.08□□□□□ -1.6
CLCNKAP51800 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.08□□□□□ -1.6
CLCNKAP51800 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC5.08□□□□□ -1.6
CLCNKAP51800 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.08□□□□□ -1.6
CLCNKAP51800 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.08□□□□□ -1.6
CLCNKAP51800 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.08□□□□□ -1.6
CLCNKAP51800 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC5.08□□□□□ -1.6
CLCNKAP51800 AC092647.2-201ENST00000452998 253 ntBASIC5.08□□□□□ -1.6
CLCNKAP51800 AC108161.1-201ENST00000461060 402 ntBASIC5.08□□□□□ -1.6
CLCNKAP51800 AC090114.3-201ENST00000479267 829 ntBASIC5.08□□□□□ -1.6
CLCNKAP51800 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.08□□□□□ -1.6
CLCNKAP51800 NPM1P29-201ENST00000483112 803 ntBASIC5.08□□□□□ -1.6
CLCNKAP51800 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms