Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AC104695.2-201ENST00000605056 775 ntBASIC4.43□□□□□ -1.7
CDX1P47902 AL355816.1-201ENST00000607951 118 ntBASIC4.43□□□□□ -1.7
CDX1P47902 AC004477.3-201ENST00000614061 590 ntBASIC4.43□□□□□ -1.7
CDX1P47902 VN1R9P-201ENST00000614184 867 ntBASIC4.43□□□□□ -1.7
CDX1P47902 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDX1P47902 AC073569.3-201ENST00000619055 682 ntBASIC4.43□□□□□ -1.7
CDX1P47902 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.43□□□□□ -1.7
CDX1P47902 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.43□□□□□ -1.7
CDX1P47902 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDX1P47902 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDX1P47902 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDX1P47902 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDX1P47902 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDX1P47902 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDX1P47902 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
CDX1P47902 AC006042.3-201ENST00000454684 1469 ntBASIC4.43□□□□□ -1.7
CDX1P47902 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
CDX1P47902 YES1P1-201ENST00000418510 1628 ntBASIC4.43□□□□□ -1.7
CDX1P47902 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDX1P47902 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDX1P47902 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CDX1P47902 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDX1P47902 AFP-201ENST00000226359 1914 ntTSL 5 BASIC4.42□□□□□ -1.7
CDX1P47902 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.42□□□□□ -1.7
CDX1P47902 AC017007.4-201ENST00000503353 1352 ntBASIC4.42□□□□□ -1.7
CDX1P47902 LINC01963-201ENST00000562038 3148 ntBASIC4.42□□□□□ -1.7
CDX1P47902 AL450326.2-201ENST00000421913 1962 ntBASIC4.42□□□□□ -1.7
CDX1P47902 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.42□□□□□ -1.7
CDX1P47902 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.42□□□□□ -1.7
CDX1P47902 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDX1P47902 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDX1P47902 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CDX1P47902 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDX1P47902 RNA5SP131-201ENST00000365452 119 ntBASIC4.42□□□□□ -1.7
CDX1P47902 BMS1P3-201ENST00000372011 932 ntBASIC4.42□□□□□ -1.7
CDX1P47902 SNORA68.2-201ENST00000391263 128 ntBASIC4.42□□□□□ -1.7
CDX1P47902 AL035419.1-201ENST00000397037 564 ntBASIC4.42□□□□□ -1.7
CDX1P47902 RN7SKP199-201ENST00000410325 305 ntBASIC4.42□□□□□ -1.7
CDX1P47902 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.42□□□□□ -1.7
CDX1P47902 AL596448.1-201ENST00000415024 392 ntBASIC4.42□□□□□ -1.7
CDX1P47902 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.42□□□□□ -1.7
CDX1P47902 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.42□□□□□ -1.7
CDX1P47902 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.42□□□□□ -1.7
CDX1P47902 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.42□□□□□ -1.7
CDX1P47902 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC4.42□□□□□ -1.7
CDX1P47902 HSPD1P12-201ENST00000429127 1069 ntBASIC4.42□□□□□ -1.7
CDX1P47902 MRPL50P1-201ENST00000431951 384 ntBASIC4.42□□□□□ -1.7
CDX1P47902 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.42□□□□□ -1.7
CDX1P47902 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDX1P47902 NDUFB4P8-201ENST00000435351 367 ntBASIC4.42□□□□□ -1.7
CDX1P47902 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.42□□□□□ -1.7
CDX1P47902 AC006994.1-201ENST00000438212 839 ntBASIC4.42□□□□□ -1.7
CDX1P47902 EEF1B2P6-201ENST00000445713 673 ntBASIC4.42□□□□□ -1.7
CDX1P47902 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.42□□□□□ -1.7
CDX1P47902 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.42□□□□□ -1.7
CDX1P47902 MTND2P8-201ENST00000450555 1025 ntBASIC4.42□□□□□ -1.7
CDX1P47902 AL645937.3-201ENST00000453647 936 ntBASIC4.42□□□□□ -1.7
CDX1P47902 AC004129.2-201ENST00000457229 287 ntBASIC4.42□□□□□ -1.7
CDX1P47902 RN7SL515P-201ENST00000463999 297 ntBASIC4.42□□□□□ -1.7
CDX1P47902 AC006511.1-201ENST00000470614 315 ntBASIC4.42□□□□□ -1.7
CDX1P47902 CBX1P5-201ENST00000475330 559 ntBASIC4.42□□□□□ -1.7
CDX1P47902 TRBV8-2-201ENST00000475637 270 ntBASIC4.42□□□□□ -1.7
CDX1P47902 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.42□□□□□ -1.7
CDX1P47902 TPT1P3-201ENST00000492841 512 ntBASIC4.42□□□□□ -1.7
CDX1P47902 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.42□□□□□ -1.7
CDX1P47902 RPL7L1P4-201ENST00000513004 707 ntBASIC4.42□□□□□ -1.7
CDX1P47902 IGKV2-36-201ENST00000519999 223 ntBASIC4.42□□□□□ -1.7
CDX1P47902 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CDX1P47902 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.42□□□□□ -1.7
CDX1P47902 AC022882.1-201ENST00000532142 501 ntBASIC4.42□□□□□ -1.7
CDX1P47902 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.42□□□□□ -1.7
CDX1P47902 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.42□□□□□ -1.7
CDX1P47902 AC018552.3-201ENST00000567416 561 ntBASIC4.42□□□□□ -1.7
CDX1P47902 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.42□□□□□ -1.7
CDX1P47902 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.42□□□□□ -1.7
CDX1P47902 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.42□□□□□ -1.7
CDX1P47902 AC124283.4-201ENST00000581815 456 ntBASIC4.42□□□□□ -1.7
CDX1P47902 EIF1P5-201ENST00000585002 234 ntBASIC4.42□□□□□ -1.7
CDX1P47902 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.42□□□□□ -1.7
CDX1P47902 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.42□□□□□ -1.7
CDX1P47902 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.42□□□□□ -1.7
CDX1P47902 AC233280.2-201ENST00000603917 1070 ntBASIC4.42□□□□□ -1.7
CDX1P47902 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.42□□□□□ -1.7
CDX1P47902 HIRAP1-201ENST00000605318 787 ntBASIC4.42□□□□□ -1.7
CDX1P47902 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.42□□□□□ -1.7
CDX1P47902 AC138907.10-201ENST00000623708 983 ntBASIC4.42□□□□□ -1.7
CDX1P47902 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.42□□□□□ -1.7
CDX1P47902 U6.107-201ENST00000637108 79 ntBASIC4.42□□□□□ -1.7
CDX1P47902 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDX1P47902 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDX1P47902 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.42□□□□□ -1.7
CDX1P47902 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDX1P47902 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDX1P47902 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.42□□□□□ -1.7
CDX1P47902 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
CDX1P47902 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDX1P47902 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDX1P47902 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDX1P47902 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDX1P47902 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms