Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.47□□□□□ -1.53
NEDD4P46934 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
NEDD4P46934 AC112206.1-201ENST00000468416 477 ntBASIC5.47□□□□□ -1.53
NEDD4P46934 RPS29P22-201ENST00000472363 168 ntBASIC5.47□□□□□ -1.53
NEDD4P46934 AC104763.1-201ENST00000475274 360 ntBASIC5.47□□□□□ -1.53
NEDD4P46934 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.47□□□□□ -1.53
NEDD4P46934 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.47□□□□□ -1.53
NEDD4P46934 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.47□□□□□ -1.53
NEDD4P46934 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.47□□□□□ -1.53
NEDD4P46934 OR5AN2P-201ENST00000534535 896 ntBASIC5.47□□□□□ -1.53
NEDD4P46934 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.47□□□□□ -1.53
NEDD4P46934 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.47□□□□□ -1.53
NEDD4P46934 HMGN2P47-201ENST00000559378 272 ntBASIC5.47□□□□□ -1.53
NEDD4P46934 MIR4330-201ENST00000579077 105 ntBASIC5.47□□□□□ -1.53
NEDD4P46934 AC090953.1-201ENST00000604305 1092 ntBASIC5.47□□□□□ -1.53
NEDD4P46934 AC107905.1-201ENST00000616204 426 ntBASIC5.47□□□□□ -1.53
NEDD4P46934 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.47□□□□□ -1.53
NEDD4P46934 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.47□□□□□ -1.53
NEDD4P46934 AP000550.3-201ENST00000637734 379 ntBASIC5.47□□□□□ -1.53
NEDD4P46934 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.46□□□□□ -1.53
NEDD4P46934 AC126323.6-202ENST00000568092 3511 ntBASIC5.46□□□□□ -1.53
NEDD4P46934 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
NEDD4P46934 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
NEDD4P46934 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
NEDD4P46934 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.53
NEDD4P46934 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
NEDD4P46934 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
NEDD4P46934 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
NEDD4P46934 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
NEDD4P46934 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC5.46□□□□□ -1.54
NEDD4P46934 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.46□□□□□ -1.54
NEDD4P46934 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
NEDD4P46934 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NEDD4P46934 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
NEDD4P46934 AL391684.1-202ENST00000641293 1636 ntBASIC5.46□□□□□ -1.54
NEDD4P46934 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NEDD4P46934 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NEDD4P46934 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
NEDD4P46934 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
NEDD4P46934 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NEDD4P46934 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NEDD4P46934 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NEDD4P46934 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
NEDD4P46934 MIR192-201ENST00000384915 110 ntBASIC5.46□□□□□ -1.54
NEDD4P46934 SNORD96B-201ENST00000386148 79 ntBASIC5.46□□□□□ -1.54
NEDD4P46934 RNA5SP332-201ENST00000391063 115 ntBASIC5.46□□□□□ -1.54
NEDD4P46934 RPL37P18-201ENST00000411602 243 ntBASIC5.46□□□□□ -1.54
NEDD4P46934 AC092570.3-201ENST00000420113 693 ntBASIC5.46□□□□□ -1.54
NEDD4P46934 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.46□□□□□ -1.54
NEDD4P46934 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.46□□□□□ -1.54
NEDD4P46934 NPM1P48-201ENST00000436002 853 ntBASIC5.46□□□□□ -1.54
NEDD4P46934 YWHAZP2-201ENST00000440317 728 ntBASIC5.46□□□□□ -1.54
NEDD4P46934 MRPL48P1-201ENST00000445390 636 ntBASIC5.46□□□□□ -1.54
NEDD4P46934 SCARNA10-201ENST00000459255 330 ntBASIC5.46□□□□□ -1.54
NEDD4P46934 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.46□□□□□ -1.54
NEDD4P46934 OR52A4P-201ENST00000472867 958 ntBASIC5.46□□□□□ -1.54
NEDD4P46934 AC098799.1-201ENST00000504752 800 ntBASIC5.46□□□□□ -1.54
NEDD4P46934 AP001960.1-201ENST00000506494 658 ntBASIC5.46□□□□□ -1.54
NEDD4P46934 RNU6-551P-201ENST00000516661 103 ntBASIC5.46□□□□□ -1.54
NEDD4P46934 AC025857.1-201ENST00000525252 377 ntBASIC5.46□□□□□ -1.54
NEDD4P46934 AP001781.1-201ENST00000530977 207 ntBASIC5.46□□□□□ -1.54
NEDD4P46934 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.46□□□□□ -1.54
NEDD4P46934 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.46□□□□□ -1.54
NEDD4P46934 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.46□□□□□ -1.54
NEDD4P46934 AC006363.1-201ENST00000603806 463 ntBASIC5.46□□□□□ -1.54
NEDD4P46934 AP000346.3-201ENST00000622821 210 ntBASIC5.46□□□□□ -1.54
NEDD4P46934 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
NEDD4P46934 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
NEDD4P46934 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.45□□□□□ -1.54
NEDD4P46934 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
NEDD4P46934 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NEDD4P46934 OR14L1P-202ENST00000641545 3009 ntBASIC5.45□□□□□ -1.54
NEDD4P46934 SNORD113.2-201ENST00000364166 89 ntBASIC5.45□□□□□ -1.54
NEDD4P46934 RPS16P5-201ENST00000406501 404 ntBASIC5.45□□□□□ -1.54
NEDD4P46934 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.45□□□□□ -1.54
NEDD4P46934 Z74021.1-201ENST00000423610 407 ntBASIC5.45□□□□□ -1.54
NEDD4P46934 RPEP3-201ENST00000425462 676 ntBASIC5.45□□□□□ -1.54
NEDD4P46934 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
NEDD4P46934 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.45□□□□□ -1.54
NEDD4P46934 AC098799.3-201ENST00000506095 438 ntBASIC5.45□□□□□ -1.54
NEDD4P46934 SNORD116-30-201ENST00000516468 85 ntBASIC5.45□□□□□ -1.54
NEDD4P46934 FTH1P11-201ENST00000517577 551 ntBASIC5.45□□□□□ -1.54
NEDD4P46934 CDH12P4-201ENST00000517835 295 ntBASIC5.45□□□□□ -1.54
NEDD4P46934 CDH12P3-201ENST00000517935 295 ntBASIC5.45□□□□□ -1.54
NEDD4P46934 CDH12P1-201ENST00000518435 295 ntBASIC5.45□□□□□ -1.54
NEDD4P46934 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.45□□□□□ -1.54
NEDD4P46934 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.45□□□□□ -1.54
NEDD4P46934 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.45□□□□□ -1.54
NEDD4P46934 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
NEDD4P46934 AC209154.1-201ENST00000582156 337 ntBASIC5.45□□□□□ -1.54
NEDD4P46934 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.45□□□□□ -1.54
NEDD4P46934 AC234771.5-201ENST00000600161 514 ntBASIC5.45□□□□□ -1.54
NEDD4P46934 AC005086.4-201ENST00000623065 213 ntBASIC5.45□□□□□ -1.54
NEDD4P46934 AC021106.3-201ENST00000623925 531 ntBASIC5.45□□□□□ -1.54
NEDD4P46934 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
NEDD4P46934 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
NEDD4P46934 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
NEDD4P46934 ZNF137P-201ENST00000456718 1920 ntBASIC5.44□□□□□ -1.54
NEDD4P46934 VN2R3P-201ENST00000422626 1412 ntBASIC5.44□□□□□ -1.54
NEDD4P46934 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms