Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC093591.2-201ENST00000565254 3843 ntBASIC5.09□□□□□ -1.6
BRCC3P46736 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.6
BRCC3P46736 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.09□□□□□ -1.6
BRCC3P46736 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
BRCC3P46736 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
BRCC3P46736 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
BRCC3P46736 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
BRCC3P46736 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
BRCC3P46736 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
BRCC3P46736 DHX40P1-201ENST00000588725 1412 ntBASIC5.08□□□□□ -1.6
BRCC3P46736 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.08□□□□□ -1.6
BRCC3P46736 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
BRCC3P46736 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
BRCC3P46736 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
BRCC3P46736 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
BRCC3P46736 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
BRCC3P46736 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.08□□□□□ -1.6
BRCC3P46736 AC006065.1-201ENST00000422539 802 ntBASIC5.08□□□□□ -1.6
BRCC3P46736 CENPIP1-201ENST00000425713 902 ntBASIC5.08□□□□□ -1.6
BRCC3P46736 AL451139.1-201ENST00000434718 346 ntBASIC5.08□□□□□ -1.6
BRCC3P46736 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
BRCC3P46736 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.08□□□□□ -1.6
BRCC3P46736 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.08□□□□□ -1.6
BRCC3P46736 snoU13.1-201ENST00000459157 104 ntBASIC5.08□□□□□ -1.6
BRCC3P46736 AC021660.1-201ENST00000465006 554 ntBASIC5.08□□□□□ -1.6
BRCC3P46736 AC073073.1-201ENST00000493920 463 ntBASIC5.08□□□□□ -1.6
BRCC3P46736 RNU6-513P-201ENST00000516104 104 ntBASIC5.08□□□□□ -1.6
BRCC3P46736 RNU1-6P-201ENST00000516290 144 ntBASIC5.08□□□□□ -1.6
BRCC3P46736 SNORA26.10-201ENST00000516427 141 ntBASIC5.08□□□□□ -1.6
BRCC3P46736 C1GALT1P3-201ENST00000522049 819 ntBASIC5.08□□□□□ -1.6
BRCC3P46736 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.08□□□□□ -1.6
BRCC3P46736 MTND2P17-201ENST00000550281 688 ntBASIC5.08□□□□□ -1.6
BRCC3P46736 AC011270.1-201ENST00000558606 583 ntBASIC5.08□□□□□ -1.6
BRCC3P46736 RN7SL652P-201ENST00000577769 300 ntBASIC5.08□□□□□ -1.6
BRCC3P46736 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.08□□□□□ -1.6
BRCC3P46736 VN1R81P-201ENST00000602085 372 ntBASIC5.08□□□□□ -1.6
BRCC3P46736 AC107308.1-201ENST00000615897 301 ntBASIC5.08□□□□□ -1.6
BRCC3P46736 AC012414.7-202ENST00000622705 1090 ntBASIC5.08□□□□□ -1.6
BRCC3P46736 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.08□□□□□ -1.6
BRCC3P46736 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.08□□□□□ -1.6
BRCC3P46736 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
BRCC3P46736 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
BRCC3P46736 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.08□□□□□ -1.6
BRCC3P46736 AP005432.1-201ENST00000580891 3485 ntBASIC5.07□□□□□ -1.6
BRCC3P46736 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.07□□□□□ -1.6
BRCC3P46736 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
BRCC3P46736 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
BRCC3P46736 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
BRCC3P46736 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
BRCC3P46736 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
BRCC3P46736 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
BRCC3P46736 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.07□□□□□ -1.6
BRCC3P46736 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
BRCC3P46736 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
BRCC3P46736 OR4K15-201ENST00000305051 1216 ntBASIC5.07□□□□□ -1.6
BRCC3P46736 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
BRCC3P46736 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
BRCC3P46736 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.07□□□□□ -1.6
BRCC3P46736 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.07□□□□□ -1.6
BRCC3P46736 CASKP1-201ENST00000412870 582 ntBASIC5.07□□□□□ -1.6
BRCC3P46736 AL591848.1-201ENST00000413092 322 ntBASIC5.07□□□□□ -1.6
BRCC3P46736 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.07□□□□□ -1.6
BRCC3P46736 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.07□□□□□ -1.6
BRCC3P46736 ARL2BPP10-201ENST00000446487 531 ntBASIC5.07□□□□□ -1.6
BRCC3P46736 AC012512.1-201ENST00000446594 718 ntBASIC5.07□□□□□ -1.6
BRCC3P46736 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.07□□□□□ -1.6
BRCC3P46736 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
BRCC3P46736 AK3P4-201ENST00000504283 583 ntBASIC5.07□□□□□ -1.6
BRCC3P46736 AC098799.1-201ENST00000504752 800 ntBASIC5.07□□□□□ -1.6
BRCC3P46736 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.07□□□□□ -1.6
BRCC3P46736 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.07□□□□□ -1.6
BRCC3P46736 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.07□□□□□ -1.6
BRCC3P46736 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.07□□□□□ -1.6
BRCC3P46736 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.07□□□□□ -1.6
BRCC3P46736 RPL23AP53-201ENST00000521854 457 ntBASIC5.07□□□□□ -1.6
BRCC3P46736 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.07□□□□□ -1.6
BRCC3P46736 AC025857.1-201ENST00000525252 377 ntBASIC5.07□□□□□ -1.6
BRCC3P46736 HNRNPRP2-201ENST00000528421 743 ntBASIC5.07□□□□□ -1.6
BRCC3P46736 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC5.07□□□□□ -1.6
BRCC3P46736 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.07□□□□□ -1.6
BRCC3P46736 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.07□□□□□ -1.6
BRCC3P46736 AC105129.1-201ENST00000560250 297 ntBASIC5.07□□□□□ -1.6
BRCC3P46736 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC5.07□□□□□ -1.6
BRCC3P46736 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.07□□□□□ -1.6
BRCC3P46736 AC020915.5-201ENST00000596836 964 ntBASIC5.07□□□□□ -1.6
BRCC3P46736 AL023583.1-201ENST00000607518 1143 ntBASIC5.07□□□□□ -1.6
BRCC3P46736 BX005214.3-202ENST00000619809 325 ntBASIC5.07□□□□□ -1.6
BRCC3P46736 AP000648.2-201ENST00000624182 404 ntBASIC5.07□□□□□ -1.6
BRCC3P46736 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.07□□□□□ -1.6
BRCC3P46736 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
BRCC3P46736 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.07□□□□□ -1.6
BRCC3P46736 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
BRCC3P46736 AC073136.1-201ENST00000449426 2884 ntBASIC5.07□□□□□ -1.6
BRCC3P46736 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
BRCC3P46736 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
BRCC3P46736 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
BRCC3P46736 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
BRCC3P46736 THAP12P5-201ENST00000405864 2275 ntBASIC5.07□□□□□ -1.6
BRCC3P46736 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
BRCC3P46736 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms