Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AL049779.2-201ENST00000553847 315 ntBASIC5.04□□□□□ -1.6
HNF4AP41235 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
HNF4AP41235 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.04□□□□□ -1.6
HNF4AP41235 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC5.04□□□□□ -1.6
HNF4AP41235 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.04□□□□□ -1.6
HNF4AP41235 AC242628.1-201ENST00000606810 391 ntBASIC5.04□□□□□ -1.6
HNF4AP41235 MIR6886-201ENST00000619864 61 ntBASIC5.04□□□□□ -1.6
HNF4AP41235 AC020923.1-201ENST00000624021 917 ntBASIC5.04□□□□□ -1.6
HNF4AP41235 AP000720.1-201ENST00000625091 483 ntBASIC5.04□□□□□ -1.6
HNF4AP41235 AC135068.12-201ENST00000637370 931 ntBASIC5.04□□□□□ -1.6
HNF4AP41235 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
HNF4AP41235 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HNF4AP41235 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HNF4AP41235 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.04□□□□□ -1.6
HNF4AP41235 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HNF4AP41235 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.04□□□□□ -1.6
HNF4AP41235 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
HNF4AP41235 DDX6P1-205ENST00000441966 1436 ntBASIC5.04□□□□□ -1.6
HNF4AP41235 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
HNF4AP41235 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HNF4AP41235 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
HNF4AP41235 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HNF4AP41235 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
HNF4AP41235 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HNF4AP41235 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.03□□□□□ -1.6
HNF4AP41235 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HNF4AP41235 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.03□□□□□ -1.6
HNF4AP41235 RNA5SP90-201ENST00000364801 99 ntBASIC5.03□□□□□ -1.6
HNF4AP41235 Z86062.1-201ENST00000406773 777 ntBASIC5.03□□□□□ -1.6
HNF4AP41235 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.03□□□□□ -1.6
HNF4AP41235 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HNF4AP41235 MTATP6P11-201ENST00000428071 670 ntBASIC5.03□□□□□ -1.6
HNF4AP41235 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.03□□□□□ -1.6
HNF4AP41235 RPS29P10-201ENST00000439197 166 ntBASIC5.03□□□□□ -1.6
HNF4AP41235 HMGB3P9-201ENST00000441799 583 ntBASIC5.03□□□□□ -1.6
HNF4AP41235 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.03□□□□□ -1.6
HNF4AP41235 CYCSP24-201ENST00000445119 316 ntBASIC5.03□□□□□ -1.6
HNF4AP41235 GEMIN8P3-201ENST00000445417 720 ntBASIC5.03□□□□□ -1.6
HNF4AP41235 AL500527.1-201ENST00000448532 255 ntBASIC5.03□□□□□ -1.6
HNF4AP41235 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC5.03□□□□□ -1.6
HNF4AP41235 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.03□□□□□ -1.6
HNF4AP41235 AL513343.1-201ENST00000451818 792 ntBASIC5.03□□□□□ -1.6
HNF4AP41235 IFNWP4-201ENST00000453148 294 ntBASIC5.03□□□□□ -1.6
HNF4AP41235 AC011225.1-201ENST00000457751 369 ntBASIC5.03□□□□□ -1.6
HNF4AP41235 AC107398.1-201ENST00000486904 505 ntBASIC5.03□□□□□ -1.6
HNF4AP41235 MYL12BP2-201ENST00000503948 512 ntBASIC5.03□□□□□ -1.6
HNF4AP41235 NPM1P6-201ENST00000521088 871 ntBASIC5.03□□□□□ -1.6
HNF4AP41235 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.03□□□□□ -1.6
HNF4AP41235 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
HNF4AP41235 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
HNF4AP41235 PDCD5P1-201ENST00000543528 309 ntBASIC5.03□□□□□ -1.6
HNF4AP41235 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.03□□□□□ -1.6
HNF4AP41235 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.03□□□□□ -1.6
HNF4AP41235 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.03□□□□□ -1.6
HNF4AP41235 AC084757.1-201ENST00000559987 490 ntBASIC5.03□□□□□ -1.6
HNF4AP41235 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HNF4AP41235 MIR4716-201ENST00000579628 84 ntBASIC5.03□□□□□ -1.6
HNF4AP41235 RN7SL753P-201ENST00000581238 290 ntBASIC5.03□□□□□ -1.6
HNF4AP41235 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.03□□□□□ -1.6
HNF4AP41235 MIR548Y-201ENST00000582739 110 ntBASIC5.03□□□□□ -1.6
HNF4AP41235 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.03□□□□□ -1.6
HNF4AP41235 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.03□□□□□ -1.6
HNF4AP41235 AC069307.1-201ENST00000602820 447 ntBASIC5.03□□□□□ -1.6
HNF4AP41235 AC133552.5-201ENST00000604266 540 ntBASIC5.03□□□□□ -1.6
HNF4AP41235 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.03□□□□□ -1.6
HNF4AP41235 AC055764.2-201ENST00000610089 670 ntBASIC5.03□□□□□ -1.6
HNF4AP41235 MIR6826-201ENST00000617808 98 ntBASIC5.03□□□□□ -1.6
HNF4AP41235 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.03□□□□□ -1.6
HNF4AP41235 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.03□□□□□ -1.6
HNF4AP41235 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HNF4AP41235 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
HNF4AP41235 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
HNF4AP41235 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.03□□□□□ -1.6
HNF4AP41235 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.03□□□□□ -1.6
HNF4AP41235 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
HNF4AP41235 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.03□□□□□ -1.6
HNF4AP41235 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
HNF4AP41235 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.03□□□□□ -1.6
HNF4AP41235 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
HNF4AP41235 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.03□□□□□ -1.6
HNF4AP41235 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.03□□□□□ -1.6
HNF4AP41235 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HNF4AP41235 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
HNF4AP41235 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.02□□□□□ -1.61
HNF4AP41235 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
HNF4AP41235 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HNF4AP41235 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
HNF4AP41235 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
HNF4AP41235 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
HNF4AP41235 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
HNF4AP41235 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
HNF4AP41235 U3.3-201ENST00000362986 216 ntBASIC5.02□□□□□ -1.61
HNF4AP41235 RNU1-43P-201ENST00000365052 165 ntBASIC5.02□□□□□ -1.61
HNF4AP41235 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
HNF4AP41235 GTF3AP1-201ENST00000416942 1004 ntBASIC5.02□□□□□ -1.61
HNF4AP41235 RPS24P8-201ENST00000431490 402 ntBASIC5.02□□□□□ -1.61
HNF4AP41235 RPL34P26-201ENST00000445636 354 ntBASIC5.02□□□□□ -1.61
HNF4AP41235 AC021660.1-201ENST00000465006 554 ntBASIC5.02□□□□□ -1.61
HNF4AP41235 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.02□□□□□ -1.61
HNF4AP41235 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms