Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.81□□□□□ -1.64
HMGCLP35914 MIR5699-201ENST00000578903 90 ntBASIC4.81□□□□□ -1.64
HMGCLP35914 MIR3934-201ENST00000579806 107 ntBASIC4.81□□□□□ -1.64
HMGCLP35914 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.81□□□□□ -1.64
HMGCLP35914 AC009303.3-201ENST00000591103 736 ntBASIC4.81□□□□□ -1.64
HMGCLP35914 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.81□□□□□ -1.64
HMGCLP35914 SNORA35B-201ENST00000607417 129 ntBASIC4.81□□□□□ -1.64
HMGCLP35914 AL118556.2-201ENST00000614375 824 ntBASIC4.81□□□□□ -1.64
HMGCLP35914 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.81□□□□□ -1.64
HMGCLP35914 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMGCLP35914 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HMGCLP35914 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.81□□□□□ -1.64
HMGCLP35914 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.81□□□□□ -1.64
HMGCLP35914 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HMGCLP35914 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HMGCLP35914 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HMGCLP35914 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.8□□□□□ -1.64
HMGCLP35914 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
HMGCLP35914 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.8□□□□□ -1.64
HMGCLP35914 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HMGCLP35914 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HMGCLP35914 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.8□□□□□ -1.64
HMGCLP35914 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HMGCLP35914 AL929601.4-201ENST00000613011 1341 ntBASIC4.8□□□□□ -1.64
HMGCLP35914 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
HMGCLP35914 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.8□□□□□ -1.64
HMGCLP35914 AC000123.3-201ENST00000624029 4975 ntBASIC4.8□□□□□ -1.64
HMGCLP35914 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HMGCLP35914 RNU4-23P-201ENST00000362839 140 ntBASIC4.8□□□□□ -1.64
HMGCLP35914 RN7SKP224-201ENST00000364140 325 ntBASIC4.8□□□□□ -1.64
HMGCLP35914 MIR550A3-201ENST00000390735 95 ntBASIC4.8□□□□□ -1.64
HMGCLP35914 RNA5SP113-201ENST00000410486 84 ntBASIC4.8□□□□□ -1.64
HMGCLP35914 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.8□□□□□ -1.64
HMGCLP35914 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.8□□□□□ -1.64
HMGCLP35914 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.8□□□□□ -1.64
HMGCLP35914 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.8□□□□□ -1.64
HMGCLP35914 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.8□□□□□ -1.64
HMGCLP35914 MRPL48P1-201ENST00000445390 636 ntBASIC4.8□□□□□ -1.64
HMGCLP35914 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.8□□□□□ -1.64
HMGCLP35914 RN7SL610P-201ENST00000463845 291 ntBASIC4.8□□□□□ -1.64
HMGCLP35914 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.8□□□□□ -1.64
HMGCLP35914 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.8□□□□□ -1.64
HMGCLP35914 RPL21P6-201ENST00000479171 504 ntBASIC4.8□□□□□ -1.64
HMGCLP35914 AC104971.1-201ENST00000495117 578 ntBASIC4.8□□□□□ -1.64
HMGCLP35914 HMGB3P16-201ENST00000508037 287 ntBASIC4.8□□□□□ -1.64
HMGCLP35914 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.8□□□□□ -1.64
HMGCLP35914 AC026616.1-201ENST00000523157 525 ntBASIC4.8□□□□□ -1.64
HMGCLP35914 BNIP3P1-201ENST00000547295 580 ntBASIC4.8□□□□□ -1.64
HMGCLP35914 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HMGCLP35914 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HMGCLP35914 MIR4737-201ENST00000583979 81 ntBASIC4.8□□□□□ -1.64
HMGCLP35914 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.8□□□□□ -1.64
HMGCLP35914 FAM27B-201ENST00000610601 213 ntBASIC4.8□□□□□ -1.64
HMGCLP35914 AC022106.2-201ENST00000620114 757 ntBASIC4.8□□□□□ -1.64
HMGCLP35914 AL445528.2-201ENST00000620582 470 ntBASIC4.8□□□□□ -1.64
HMGCLP35914 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.8□□□□□ -1.64
HMGCLP35914 AP003499.2-201ENST00000624100 483 ntBASIC4.8□□□□□ -1.64
HMGCLP35914 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
HMGCLP35914 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HMGCLP35914 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.8□□□□□ -1.64
HMGCLP35914 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
HMGCLP35914 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HMGCLP35914 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HMGCLP35914 CASC19-206ENST00000641028 1430 ntBASIC4.8□□□□□ -1.64
HMGCLP35914 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HMGCLP35914 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
HMGCLP35914 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.79□□□□□ -1.64
HMGCLP35914 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.79□□□□□ -1.64
HMGCLP35914 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.79□□□□□ -1.64
HMGCLP35914 AL672167.1-204ENST00000641875 3017 ntBASIC4.79□□□□□ -1.64
HMGCLP35914 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
HMGCLP35914 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.79□□□□□ -1.64
HMGCLP35914 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.79□□□□□ -1.64
HMGCLP35914 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.79□□□□□ -1.64
HMGCLP35914 AC013470.3-201ENST00000420252 1194 ntBASIC4.79□□□□□ -1.64
HMGCLP35914 NRBF2P3-201ENST00000432731 865 ntBASIC4.79□□□□□ -1.64
HMGCLP35914 LYPLA1P1-201ENST00000434514 622 ntBASIC4.79□□□□□ -1.64
HMGCLP35914 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.79□□□□□ -1.64
HMGCLP35914 OR1H1P-201ENST00000448731 937 ntBASIC4.79□□□□□ -1.64
HMGCLP35914 RHEBP2-201ENST00000450289 600 ntBASIC4.79□□□□□ -1.64
HMGCLP35914 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.79□□□□□ -1.64
HMGCLP35914 RPS3AP53-201ENST00000454716 778 ntBASIC4.79□□□□□ -1.64
HMGCLP35914 AC098583.1-201ENST00000480875 255 ntBASIC4.79□□□□□ -1.64
HMGCLP35914 AC090686.1-201ENST00000481577 749 ntBASIC4.79□□□□□ -1.64
HMGCLP35914 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.79□□□□□ -1.64
HMGCLP35914 SCARNA22-201ENST00000503991 125 ntBASIC4.79□□□□□ -1.64
HMGCLP35914 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.79□□□□□ -1.64
HMGCLP35914 BTG4P1-201ENST00000510421 183 ntBASIC4.79□□□□□ -1.64
HMGCLP35914 RNU1-6P-201ENST00000516290 144 ntBASIC4.79□□□□□ -1.64
HMGCLP35914 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.79□□□□□ -1.64
HMGCLP35914 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HMGCLP35914 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.79□□□□□ -1.64
HMGCLP35914 AC133555.2-201ENST00000550213 292 ntBASIC4.79□□□□□ -1.64
HMGCLP35914 AL031320.1-201ENST00000604177 357 ntBASIC4.79□□□□□ -1.64
HMGCLP35914 AC096553.1-201ENST00000605169 829 ntBASIC4.79□□□□□ -1.64
HMGCLP35914 AL391358.1-201ENST00000605342 190 ntBASIC4.79□□□□□ -1.64
HMGCLP35914 AL391597.1-201ENST00000618707 694 ntBASIC4.79□□□□□ -1.64
HMGCLP35914 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.79□□□□□ -1.64
HMGCLP35914 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.79□□□□□ -1.64
HMGCLP35914 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms