Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.51□□□□□ -1.69
COL5A1P20908 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.51□□□□□ -1.69
COL5A1P20908 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.51□□□□□ -1.69
COL5A1P20908 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.51□□□□□ -1.69
COL5A1P20908 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.51□□□□□ -1.69
COL5A1P20908 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.51□□□□□ -1.69
COL5A1P20908 AP003497.2-201ENST00000624220 967 ntBASIC4.51□□□□□ -1.69
COL5A1P20908 MAPK10-286ENST00000641208 8747 ntBASIC4.51□□□□□ -1.69
COL5A1P20908 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL5A1P20908 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COL5A1P20908 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.5□□□□□ -1.69
COL5A1P20908 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
COL5A1P20908 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.5□□□□□ -1.69
COL5A1P20908 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL5A1P20908 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL5A1P20908 CASC19-206ENST00000641028 1430 ntBASIC4.5□□□□□ -1.69
COL5A1P20908 AC011755.1-201ENST00000623763 2049 ntBASIC4.5□□□□□ -1.69
COL5A1P20908 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COL5A1P20908 SNORD46.1-201ENST00000364139 104 ntBASIC4.5□□□□□ -1.69
COL5A1P20908 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
COL5A1P20908 SDHCP2-201ENST00000398565 501 ntBASIC4.5□□□□□ -1.69
COL5A1P20908 U3.35-201ENST00000408405 208 ntBASIC4.5□□□□□ -1.69
COL5A1P20908 CASKP1-201ENST00000412870 582 ntBASIC4.5□□□□□ -1.69
COL5A1P20908 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.5□□□□□ -1.69
COL5A1P20908 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.5□□□□□ -1.69
COL5A1P20908 OR4C10P-201ENST00000434991 931 ntBASIC4.5□□□□□ -1.69
COL5A1P20908 AC093166.2-201ENST00000455969 1017 ntBASIC4.5□□□□□ -1.69
COL5A1P20908 SCARNA10-201ENST00000459255 330 ntBASIC4.5□□□□□ -1.69
COL5A1P20908 RPL7P19-201ENST00000469948 618 ntBASIC4.5□□□□□ -1.69
COL5A1P20908 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.5□□□□□ -1.69
COL5A1P20908 SCARNA13-201ENST00000516672 275 ntBASIC4.5□□□□□ -1.69
COL5A1P20908 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
COL5A1P20908 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.5□□□□□ -1.69
COL5A1P20908 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.5□□□□□ -1.69
COL5A1P20908 AL133243.1-201ENST00000614487 366 ntBASIC4.5□□□□□ -1.69
COL5A1P20908 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL5A1P20908 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
COL5A1P20908 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
COL5A1P20908 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC4.5□□□□□ -1.69
COL5A1P20908 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
COL5A1P20908 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL5A1P20908 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.5□□□□□ -1.69
COL5A1P20908 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL5A1P20908 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL5A1P20908 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
COL5A1P20908 AC100778.3-201ENST00000580060 1750 ntBASIC4.5□□□□□ -1.69
COL5A1P20908 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL5A1P20908 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC4.49□□□□□ -1.69
COL5A1P20908 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
COL5A1P20908 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
COL5A1P20908 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL5A1P20908 MIR659-201ENST00000384963 97 ntBASIC4.49□□□□□ -1.69
COL5A1P20908 RPL7AP25-201ENST00000423357 805 ntBASIC4.49□□□□□ -1.69
COL5A1P20908 NDUFA5P1-201ENST00000433858 341 ntBASIC4.49□□□□□ -1.69
COL5A1P20908 BTF3P6-201ENST00000448054 499 ntBASIC4.49□□□□□ -1.69
COL5A1P20908 RN7SL542P-201ENST00000467147 294 ntBASIC4.49□□□□□ -1.69
COL5A1P20908 RPL21P126-201ENST00000470049 478 ntBASIC4.49□□□□□ -1.69
COL5A1P20908 IGLVIV-65-201ENST00000517313 360 ntBASIC4.49□□□□□ -1.69
COL5A1P20908 RPL23AP53-201ENST00000521854 457 ntBASIC4.49□□□□□ -1.69
COL5A1P20908 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL5A1P20908 AC093249.4-201ENST00000564755 259 ntBASIC4.49□□□□□ -1.69
COL5A1P20908 MIR4444-1-201ENST00000581696 74 ntBASIC4.49□□□□□ -1.69
COL5A1P20908 MIR4444-2-201ENST00000584390 74 ntBASIC4.49□□□□□ -1.69
COL5A1P20908 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.49□□□□□ -1.69
COL5A1P20908 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.49□□□□□ -1.69
COL5A1P20908 AC090181.2-201ENST00000602975 672 ntBASIC4.49□□□□□ -1.69
COL5A1P20908 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.49□□□□□ -1.69
COL5A1P20908 BNIP3P11-201ENST00000603878 563 ntBASIC4.49□□□□□ -1.69
COL5A1P20908 AC090948.2-201ENST00000607363 564 ntBASIC4.49□□□□□ -1.69
COL5A1P20908 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.49□□□□□ -1.69
COL5A1P20908 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.49□□□□□ -1.69
COL5A1P20908 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC4.49□□□□□ -1.69
COL5A1P20908 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.49□□□□□ -1.69
COL5A1P20908 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
COL5A1P20908 AC090017.1-201ENST00000548612 1779 ntBASIC4.49□□□□□ -1.69
COL5A1P20908 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
COL5A1P20908 SNORA70C-201ENST00000384538 135 ntBASIC4.49□□□□□ -1.69
COL5A1P20908 MIR670-201ENST00000390142 98 ntBASIC4.49□□□□□ -1.69
COL5A1P20908 RPL23AP59-201ENST00000399415 461 ntBASIC4.49□□□□□ -1.69
COL5A1P20908 AL022722.2-201ENST00000402519 180 ntBASIC4.49□□□□□ -1.69
COL5A1P20908 CTSL3P-202ENST00000412179 788 ntBASIC4.49□□□□□ -1.69
COL5A1P20908 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL5A1P20908 AC013429.2-201ENST00000418798 781 ntBASIC4.49□□□□□ -1.69
COL5A1P20908 Z74021.1-201ENST00000423610 407 ntBASIC4.49□□□□□ -1.69
COL5A1P20908 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL5A1P20908 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.49□□□□□ -1.69
COL5A1P20908 RPS29P17-201ENST00000430795 166 ntBASIC4.49□□□□□ -1.69
COL5A1P20908 RPL34P6-201ENST00000432390 345 ntBASIC4.49□□□□□ -1.69
COL5A1P20908 AC092162.1-201ENST00000432828 434 ntBASIC4.49□□□□□ -1.69
COL5A1P20908 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.49□□□□□ -1.69
COL5A1P20908 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.49□□□□□ -1.69
COL5A1P20908 AL358232.1-201ENST00000448030 501 ntBASIC4.49□□□□□ -1.69
COL5A1P20908 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.49□□□□□ -1.69
COL5A1P20908 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.49□□□□□ -1.69
COL5A1P20908 AC084783.1-201ENST00000565846 910 ntBASIC4.49□□□□□ -1.69
COL5A1P20908 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
COL5A1P20908 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.48□□□□□ -1.69
COL5A1P20908 AC105074.1-201ENST00000623380 3095 ntBASIC4.48□□□□□ -1.69
COL5A1P20908 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL5A1P20908 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms