Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
NFKB1P19838 OR5BR1P-201ENST00000524992 1330 ntBASIC6.8□□□□□ -1.32
NFKB1P19838 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.8□□□□□ -1.32
NFKB1P19838 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.8□□□□□ -1.32
NFKB1P19838 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.8□□□□□ -1.32
NFKB1P19838 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.8□□□□□ -1.32
NFKB1P19838 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NFKB1P19838 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.8□□□□□ -1.32
NFKB1P19838 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NFKB1P19838 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NFKB1P19838 SYF2-202ENST00000354361 926 ntTSL 2 BASIC6.8□□□□□ -1.32
NFKB1P19838 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
NFKB1P19838 AC074375.1-201ENST00000372993 192 ntBASIC6.8□□□□□ -1.32
NFKB1P19838 RNU6-185P-201ENST00000384421 107 ntBASIC6.8□□□□□ -1.32
NFKB1P19838 MT-RNR2-201ENST00000387347 1559 ntBASIC6.8□□□□□ -1.32
NFKB1P19838 MT-TP-201ENST00000387461 68 ntBASIC6.8□□□□□ -1.32
NFKB1P19838 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
NFKB1P19838 UBBP1-201ENST00000392399 473 ntBASIC6.8□□□□□ -1.32
NFKB1P19838 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NFKB1P19838 MRPL32P1-201ENST00000406301 247 ntBASIC6.8□□□□□ -1.32
NFKB1P19838 AL136100.1-201ENST00000407696 330 ntBASIC6.8□□□□□ -1.32
NFKB1P19838 AC062016.2-201ENST00000420950 676 ntBASIC6.8□□□□□ -1.32
NFKB1P19838 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NFKB1P19838 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.8□□□□□ -1.32
NFKB1P19838 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.8□□□□□ -1.32
NFKB1P19838 MTCYBP6-201ENST00000441810 138 ntBASIC6.8□□□□□ -1.32
NFKB1P19838 CALM1P1-201ENST00000442082 433 ntBASIC6.8□□□□□ -1.32
NFKB1P19838 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.8□□□□□ -1.32
NFKB1P19838 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC6.8□□□□□ -1.32
NFKB1P19838 AL133480.2-201ENST00000456723 487 ntBASIC6.8□□□□□ -1.32
NFKB1P19838 AC091564.1-201ENST00000464563 479 ntBASIC6.8□□□□□ -1.32
NFKB1P19838 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
NFKB1P19838 AC010307.1-201ENST00000467206 836 ntBASIC6.8□□□□□ -1.32
NFKB1P19838 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.8□□□□□ -1.32
NFKB1P19838 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.8□□□□□ -1.32
NFKB1P19838 AC104825.1-201ENST00000503186 685 ntTSL 3 BASIC6.8□□□□□ -1.32
NFKB1P19838 AC114981.1-201ENST00000503897 678 ntBASIC6.8□□□□□ -1.32
NFKB1P19838 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC6.8□□□□□ -1.32
NFKB1P19838 AC007068.2-201ENST00000543168 395 ntBASIC6.8□□□□□ -1.32
NFKB1P19838 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.8□□□□□ -1.32
NFKB1P19838 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.8□□□□□ -1.32
NFKB1P19838 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.8□□□□□ -1.32
NFKB1P19838 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NFKB1P19838 PPIAP14-201ENST00000577627 496 ntBASIC6.8□□□□□ -1.32
NFKB1P19838 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC6.8□□□□□ -1.32
NFKB1P19838 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC6.8□□□□□ -1.32
NFKB1P19838 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.8□□□□□ -1.32
NFKB1P19838 AC087283.1-201ENST00000604029 1074 ntBASIC6.8□□□□□ -1.32
NFKB1P19838 AC062029.1-202ENST00000606164 3651 ntBASIC6.8□□□□□ -1.32
NFKB1P19838 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.8□□□□□ -1.32
NFKB1P19838 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.8□□□□□ -1.32
NFKB1P19838 AC027506.1-201ENST00000621395 198 ntBASIC6.8□□□□□ -1.32
NFKB1P19838 AC061999.1-201ENST00000624454 177 ntBASIC6.8□□□□□ -1.32
NFKB1P19838 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.8□□□□□ -1.32
NFKB1P19838 OR4G11P-202ENST00000642116 1414 ntBASIC6.8□□□□□ -1.32
NFKB1P19838 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
NFKB1P19838 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
NFKB1P19838 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NFKB1P19838 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
NFKB1P19838 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
NFKB1P19838 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC6.8□□□□□ -1.32
NFKB1P19838 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
NFKB1P19838 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.8□□□□□ -1.32
NFKB1P19838 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
NFKB1P19838 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
NFKB1P19838 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NFKB1P19838 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NFKB1P19838 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NFKB1P19838 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.79□□□□□ -1.32
NFKB1P19838 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NFKB1P19838 AL589993.1-201ENST00000407450 2524 ntBASIC6.79□□□□□ -1.32
NFKB1P19838 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.79□□□□□ -1.32
NFKB1P19838 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
NFKB1P19838 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NFKB1P19838 RNU6-1085P-201ENST00000363576 107 ntBASIC6.79□□□□□ -1.32
NFKB1P19838 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NFKB1P19838 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
NFKB1P19838 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC6.79□□□□□ -1.32
NFKB1P19838 Y_RNA.409-201ENST00000383990 98 ntBASIC6.79□□□□□ -1.32
NFKB1P19838 MIR431-201ENST00000385266 114 ntBASIC6.79□□□□□ -1.32
NFKB1P19838 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
NFKB1P19838 SNRPEP2-201ENST00000397592 279 ntBASIC6.79□□□□□ -1.32
NFKB1P19838 AL590635.1-201ENST00000406314 586 ntBASIC6.79□□□□□ -1.32
NFKB1P19838 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC6.79□□□□□ -1.32
NFKB1P19838 RNA5SP231-201ENST00000410496 138 ntBASIC6.79□□□□□ -1.32
NFKB1P19838 RN7SKP296-201ENST00000411185 341 ntBASIC6.79□□□□□ -1.32
NFKB1P19838 OR51A3P-201ENST00000413596 924 ntBASIC6.79□□□□□ -1.32
NFKB1P19838 HMGB3P20-201ENST00000417997 600 ntBASIC6.79□□□□□ -1.32
NFKB1P19838 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
NFKB1P19838 AL035410.1-201ENST00000427409 427 ntBASIC6.79□□□□□ -1.32
NFKB1P19838 BX890604.2-201ENST00000427883 474 ntBASIC6.79□□□□□ -1.32
NFKB1P19838 SNRPGP6-201ENST00000451124 220 ntBASIC6.79□□□□□ -1.32
NFKB1P19838 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
NFKB1P19838 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC6.79□□□□□ -1.32
NFKB1P19838 FABP3P2-201ENST00000453169 399 ntBASIC6.79□□□□□ -1.32
NFKB1P19838 RPL26P30-201ENST00000453533 435 ntBASIC6.79□□□□□ -1.32
NFKB1P19838 RPL36AP55-201ENST00000454114 305 ntBASIC6.79□□□□□ -1.32
NFKB1P19838 PSMC1P13-201ENST00000458195 985 ntBASIC6.79□□□□□ -1.32
NFKB1P19838 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC6.79□□□□□ -1.32
NFKB1P19838 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms