Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 AC104964.3-201ENST00000606115 2860 ntBASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 CASC19-284ENST00000642142 1868 ntBASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 MAPK10-338ENST00000641647 3362 ntBASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 RNA5SP123-201ENST00000363244 119 ntBASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 AL035419.1-201ENST00000397037 564 ntBASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 TATDN1P1-201ENST00000414123 891 ntBASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 GJA6P-201ENST00000415117 1042 ntBASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 AL035551.1-201ENST00000446931 348 ntBASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 RPL31P44-201ENST00000447680 377 ntBASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 TRY2P-201ENST00000448860 689 ntBASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 AC069304.1-201ENST00000491593 704 ntBASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 RN7SL290P-201ENST00000578661 300 ntBASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 AC010487.1-201ENST00000594408 1172 ntBASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 AC110792.4-201ENST00000609843 298 ntBASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 AC100827.5-201ENST00000615883 426 ntBASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 AC091932.2-201ENST00000623014 291 ntBASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 AC097460.3-201ENST00000623099 442 ntBASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RAB40ALP0C0E4 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 AC093849.1-201ENST00000563631 2209 ntBASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 RNU6-666P-201ENST00000363499 107 ntBASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 RNU6-609P-201ENST00000365459 107 ntBASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 RNU1-74P-201ENST00000384108 171 ntBASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 SNORA51.8-201ENST00000384234 132 ntBASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 RN7SKP222-201ENST00000410651 315 ntBASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 RNU4-74P-201ENST00000411280 161 ntBASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 BX119904.1-201ENST00000432026 348 ntBASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 AP000936.3-201ENST00000438127 255 ntBASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 AC016772.1-201ENST00000444170 1261 ntBASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 RPS3AP41-201ENST00000462701 778 ntBASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 HMGN2P25-201ENST00000486956 268 ntBASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 AC106806.2-201ENST00000509365 500 ntBASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 AC016559.2-201ENST00000510759 359 ntBASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 CD24P2-201ENST00000565486 219 ntBASIC4.87□□□□□ -1.63
RAB40ALP0C0E4 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms