Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RETP07949 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RETP07949 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RETP07949 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
RETP07949 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.03□□□□□ -1.6
RETP07949 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RETP07949 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RETP07949 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RETP07949 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
RETP07949 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RETP07949 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
RETP07949 AC100778.3-201ENST00000580060 1750 ntBASIC5.02□□□□□ -1.61
RETP07949 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RETP07949 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RETP07949 SNORA68.2-201ENST00000391263 128 ntBASIC5.02□□□□□ -1.61
RETP07949 AC010740.1-201ENST00000417035 684 ntBASIC5.02□□□□□ -1.61
RETP07949 BX510359.2-201ENST00000417920 305 ntBASIC5.02□□□□□ -1.61
RETP07949 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.02□□□□□ -1.61
RETP07949 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.02□□□□□ -1.61
RETP07949 RPSAP41-201ENST00000439695 860 ntBASIC5.02□□□□□ -1.61
RETP07949 AC083829.1-201ENST00000503756 657 ntBASIC5.02□□□□□ -1.61
RETP07949 MRPS33P2-201ENST00000507850 322 ntBASIC5.02□□□□□ -1.61
RETP07949 AC006427.1-201ENST00000514359 712 ntBASIC5.02□□□□□ -1.61
RETP07949 RN7SKP276-201ENST00000516242 268 ntBASIC5.02□□□□□ -1.61
RETP07949 HMGB1P23-201ENST00000518743 568 ntBASIC5.02□□□□□ -1.61
RETP07949 AC008814.1-201ENST00000603797 406 ntBASIC5.02□□□□□ -1.61
RETP07949 AL356218.2-201ENST00000605264 187 ntBASIC5.02□□□□□ -1.61
RETP07949 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.02□□□□□ -1.61
RETP07949 AP000648.2-201ENST00000624182 404 ntBASIC5.02□□□□□ -1.61
RETP07949 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
RETP07949 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
RETP07949 MAPK10-349ENST00000641767 3661 ntBASIC5.02□□□□□ -1.61
RETP07949 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
RETP07949 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RETP07949 AC099654.2-201ENST00000433031 1980 ntBASIC5.02□□□□□ -1.61
RETP07949 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RETP07949 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.02□□□□□ -1.61
RETP07949 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC5.01□□□□□ -1.61
RETP07949 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.01□□□□□ -1.61
RETP07949 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
RETP07949 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
RETP07949 AC022893.2-201ENST00000564832 3296 ntBASIC5.01□□□□□ -1.61
RETP07949 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RETP07949 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RETP07949 FAM3C2-201ENST00000312214 681 ntBASIC5.01□□□□□ -1.61
RETP07949 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RETP07949 MIR23B-201ENST00000384832 97 ntBASIC5.01□□□□□ -1.61
RETP07949 U3.22-201ENST00000391120 215 ntBASIC5.01□□□□□ -1.61
RETP07949 SNORA57.1-201ENST00000391227 145 ntBASIC5.01□□□□□ -1.61
RETP07949 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.01□□□□□ -1.61
RETP07949 HMGB3P9-201ENST00000441799 583 ntBASIC5.01□□□□□ -1.61
RETP07949 GTF3AP5-201ENST00000442645 697 ntBASIC5.01□□□□□ -1.61
RETP07949 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.01□□□□□ -1.61
RETP07949 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.01□□□□□ -1.61
RETP07949 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.01□□□□□ -1.61
RETP07949 AC021483.2-201ENST00000567415 758 ntBASIC5.01□□□□□ -1.61
RETP07949 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.01□□□□□ -1.61
RETP07949 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.01□□□□□ -1.61
RETP07949 AC005962.2-201ENST00000611427 652 ntBASIC5.01□□□□□ -1.61
RETP07949 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
RETP07949 BX005214.3-202ENST00000619809 325 ntBASIC5.01□□□□□ -1.61
RETP07949 AP003499.2-201ENST00000624100 483 ntBASIC5.01□□□□□ -1.61
RETP07949 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.01□□□□□ -1.61
RETP07949 OR52H1-202ENST00000641796 1061 ntBASIC5.01□□□□□ -1.61
RETP07949 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
RETP07949 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
RETP07949 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RETP07949 AC245100.2-201ENST00000454544 1679 ntBASIC5.01□□□□□ -1.61
RETP07949 AC025574.1-201ENST00000554784 1653 ntBASIC5.01□□□□□ -1.61
RETP07949 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RETP07949 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.01□□□□□ -1.61
RETP07949 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RETP07949 AC006210.2-201ENST00000367074 1545 ntBASIC5.01□□□□□ -1.61
RETP07949 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.01□□□□□ -1.61
RETP07949 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.01□□□□□ -1.61
RETP07949 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.01□□□□□ -1.61
RETP07949 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
RETP07949 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RETP07949 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
RETP07949 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5□□□□□ -1.61
RETP07949 AC139713.2-214ENST00000642059 1811 ntBASIC5□□□□□ -1.61
RETP07949 CASC19-204ENST00000641001 2055 ntBASIC5□□□□□ -1.61
RETP07949 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5□□□□□ -1.61
RETP07949 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RETP07949 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5□□□□□ -1.61
RETP07949 AF186996.5-201ENST00000418098 904 ntBASIC5□□□□□ -1.61
RETP07949 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5□□□□□ -1.61
RETP07949 CDC27P1-201ENST00000445384 715 ntBASIC5□□□□□ -1.61
RETP07949 RPL7P41-201ENST00000485823 957 ntBASIC5□□□□□ -1.61
RETP07949 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5□□□□□ -1.61
RETP07949 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5□□□□□ -1.61
RETP07949 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5□□□□□ -1.61
RETP07949 DERA-209ENST00000532964 854 ntTSL 5 BASIC5□□□□□ -1.61
RETP07949 AP001880.2-201ENST00000538233 448 ntBASIC5□□□□□ -1.61
RETP07949 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5□□□□□ -1.61
RETP07949 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5□□□□□ -1.61
RETP07949 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5□□□□□ -1.61
RETP07949 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5□□□□□ -1.61
RETP07949 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5□□□□□ -1.61
RETP07949 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms